HHsearch alignment for GI: 254780877 and conserved domain: KOG1969

Probab=97.75  E-value=0.00038  Score=52.62  Aligned_cols=88  Identities=20%  Similarity=0.269  Sum_probs=59.4

Q ss_pred             CCCHHHHHHHHHHHHCCC-CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHH
Q ss_conf             333578999999963367-7786689528874077799999998734899844457437887313542174542024545
Q gi|254780877|r  180 VIGRDDEMRRAIQVLSRR-TKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEER  258 (853)
Q Consensus       180 VIGRe~EI~~~~~iL~r~-~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r  258 (853)
T Consensus       306 ~~~~~ke~~~~~~~~s~RP~kKilLL~GppGlGKTTLAHViAkq----------aGYsVvEINASDeRt----~~~v~~k  371 (877)
T KOG1969         306 KGPTEKEVLDMELDPSKRPPKKILLLCGPPGLGKTTLAHVIAKQ----------AGYSVVEINASDERT----APMVKEK  371 (877)
T ss_pred             CCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH----------CCCEEEEECCCCCCC----HHHHHHH
T ss_conf             46643455632468667984006875368878724799999986----------285488732555434----7889999


Q ss_pred             HHHHHHHHHHC---CCCEEEEECCHH
Q ss_conf             89999998607---997699963627
Q gi|254780877|r  259 LKSLLCEIRSE---DGEIILFIDELH  281 (853)
Q Consensus       259 ~~~i~~~~~~~---~~~~ilfide~h  281 (853)
T Consensus       372 I~~avq~~s~l~adsrP~CLViDEID  397 (877)
T KOG1969         372 IENAVQNHSVLDADSRPVCLVIDEID  397 (877)
T ss_pred             HHHHHHHCCCCCCCCCCCEEEEECCC
T ss_conf             99988641122568886359984246