HHsearch alignment for GI: 254780877 and conserved domain: KOG2035

Probab=97.44  E-value=0.0016  Score=47.65  Aligned_cols=199  Identities=20%  Similarity=0.254  Sum_probs=126.2

Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHC---------CCEE----
Q ss_conf             987298533333578999999963367778668952887407779999999873489984445---------7437----
Q gi|254780877|r  171 EARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLK---------GKRL----  237 (853)
Q Consensus       171 ~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~---------~~~i----  237 (853)
T Consensus         6 kyrpksl~~l~~~~e~~~~Lksl~~~~d~PHll~yGPSGaGKKTrimclL~elYG~gveklki~~~t~~tpS~kklEist   85 (351)
T KOG2035           6 KYRPKSLDELIYHEELANLLKSLSSTGDFPHLLVYGPSGAGKKTRIMCLLRELYGVGVEKLKIETRTFTTPSKKKLEIST   85 (351)
T ss_pred             HCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEECCCCCEEEEEE
T ss_conf             50751143033188888999874145778707888889887211189999988578724505666788648886379999


Q ss_pred             ----EEEEHHHHHCCCCCCCHHHHH--HHHHHHHHHHCCC--------CEEEEECCHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             ----887313542174542024545--8999999860799--------76999636277302666554335888876531
Q gi|254780877|r  238 ----MALDMGALIAGAKFRGEFEER--LKSLLCEIRSEDG--------EIILFIDELHVLVGAGKTDGAMDASNLLKPSL  303 (853)
Q Consensus       238 ----~~ld~~~l~ag~~~rg~~e~r--~~~i~~~~~~~~~--------~~ilfide~h~~~gaG~~~g~~Daan~LKP~L  303 (853)
T Consensus        86 vsS~yHlEitPSDaG------~~DRvViQellKevAQt~qie~~~qr~fKvvvi~ead~L--------T~dAQ~aLRRTM  151 (351)
T KOG2035          86 VSSNYHLEITPSDAG------NYDRVVIQELLKEVAQTQQIETQGQRPFKVVVINEADEL--------TRDAQHALRRTM  151 (351)
T ss_pred             ECCCCEEEECHHHCC------CCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECHHHH--------HHHHHHHHHHHH
T ss_conf             425651774734337------511799999999987414133326665489998035765--------088999999999


Q ss_pred             C--CCCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             2--46604899744899999730011132023111115777678999999978986541496101589999986333202
Q gi|254780877|r  304 A--RGELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYI  381 (853)
Q Consensus       304 a--rG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi  381 (853)
T Consensus       152 EkYs~~~RlIl~c--ns~SriIep---IrSRCl~iRvpaps~eeI~~vl~~v~~k----E~l~lp~~~l~rIa~kS~~nL  222 (351)
T KOG2035         152 EKYSSNCRLILVC--NSTSRIIEP---IRSRCLFIRVPAPSDEEITSVLSKVLKK----EGLQLPKELLKRIAEKSNRNL  222 (351)
T ss_pred             HHHHCCCEEEEEE--CCCCCCHHH---HHHHEEEEECCCCCHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHCCCH
T ss_conf             9986071699992--674302267---7622058767899878999999999987----334484999999999706439


Q ss_pred             CCCCCHHHHHHHHHHHH
Q ss_conf             45767477899999999
Q gi|254780877|r  382 TDRFLPDKAIDLMDEAS  398 (853)
Q Consensus       382 ~~r~lPDKAIDllDeA~  398 (853)
T Consensus       223 ------RrAllmlE~~~  233 (351)
T KOG2035         223 ------RRALLMLEAVR  233 (351)
T ss_pred             ------HHHHHHHHHHH
T ss_conf             ------99999999998