HHsearch alignment for GI: 254780877 and conserved domain: PRK00149

>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=98.11  E-value=7.1e-05  Score=58.59  Aligned_cols=198  Identities=17%  Similarity=0.359  Sum_probs=115.7

Q ss_pred             HHHHHHCCHHHHHH-HHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC--CCCCCCCCCHHHHCCCC
Q ss_conf             47767459489999-9999998741012365665128987267861688999999987237--76530022447740345
Q gi|254780877|r  565 EISKSVIGQSAAVE-SVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFD--DENSMIRIDMSEYMEKH  641 (853)
Q Consensus       565 ~l~~~v~gq~~ai~-~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~--~~~~lir~dMsey~e~~  641 (853)
T Consensus       117 TFdnFVvG~sN~lA~aAA~~V--a----~~pg~~yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~F~~~~  190 (447)
T PRK00149        117 TFDNFVVGKSNRLAHAAALAV--A----ENPGKAYNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEKFTNDF  190 (447)
T ss_pred             CCCCCEECCCCHHHHHHHHHH--H----HCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH
T ss_conf             032622269859999999999--8----3767677855897799887889999999999985899728995499999999


Q ss_pred             CCCHHHCCCCHHCCCCCCCCCCHHHHC--CCCCEEEEHHHHHC--CHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEEC
Q ss_conf             320130477112035667742113221--56410220214414--98999999998404578879997783033155954
Q gi|254780877|r  642 SVSRLIGSPPGYVGYEEGGALTEAVRR--HPYQVVLFDEIEKA--HSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMT  717 (853)
Q Consensus       642 ~vs~LiGappGYvG~~~gg~Lte~vr~--~P~sVil~DEiEKa--h~~v~~~llqild~G~ltd~~G~~v~f~n~iii~T  717 (853)
T Consensus       191 v-~al~~-----------~~-~~~Fr~~yr~~DvLliDDiqfl~gk~~tqeeff~~fn~--l~~~--------~kqiv~t  247 (447)
T PRK00149        191 V-KALRN-----------NA-MEEFKEKYRSVDVLLIDDIQFLAGKEKTQEEFFHTFNA--LHEN--------NKQIVIT  247 (447)
T ss_pred             H-HHHHC-----------CC-HHHHHHHHHCCCEEEECHHHHHHCCHHHHHHHHHHHHH--HHHC--------CCEEEEE
T ss_conf             9-99851-----------86-99999999728854321488860557799999999999--9984--------9968995


Q ss_pred             CCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHH
Q ss_conf             851268764032679999999998628857726668--158628899899999999999999999985798999988999
Q gi|254780877|r  718 SNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLD--EIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVI  795 (853)
Q Consensus       718 sN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid--~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~  795 (853)
T Consensus       248 sd~~P~~l~----------------~l~~rL~SRf~~Gl~~~i~~Pd~e~r~~Il~~k~~-------~~~--~~l~~~v~  302 (447)
T PRK00149        248 SDRPPKELE----------------GLEDRLRSRFEWGLTVDIEPPDLETRVAILQKKAE-------EEG--INLPNEVL  302 (447)
T ss_pred             CCCCHHHCC----------------CCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH-------HCC--CCCCHHHH
T ss_conf             788967656----------------51177886763762651059999999999999999-------728--99998999


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             999970898220621579999987
Q gi|254780877|r  796 DWLSCRGYDPSYGARPLKRVIQRY  819 (853)
Q Consensus       796 ~~l~~~~~~~~~GaR~l~r~i~~~  819 (853)
T Consensus       303 ~~iA~~~---~~nvR~LeGal~~l  323 (447)
T PRK00149        303 EFIAKRI---RSNIRELEGALNRL  323 (447)
T ss_pred             HHHHHHC---CCCHHHHHHHHHHH
T ss_conf             9999712---68899999999999