HHsearch alignment for GI: 254780877 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.22 E-value=4.3e-08 Score=84.72 Aligned_cols=208 Identities=21% Similarity=0.305 Sum_probs=138.4
Q ss_pred CCCCCHHHHHHHHHHHH----CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHH---------
Q ss_conf 33333578999999963----36777866895288740777999999987348998444574378873135---------
Q gi|254780877|r 178 DPVIGRDDEMRRAIQVL----SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGA--------- 244 (853)
Q Consensus 178 DPVIGRe~EI~~~~~iL----~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~--------- 244 (853)
T Consensus 30 ~~l~~Re~Ei~~l~~~l~~~l~g~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~-----~~~~~vyINc~~~~t~~~i~~ 104 (394)
T PRK00411 30 ENLPHREEQIEELAFALRPALRGSRPSNVLILGPPGTGKTTTVKKVFEELEEAA-----LKVVYVYINCQIDRTRYAILS 104 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC-----CCCEEEEEECCCCCCHHHHHH
T ss_conf 989885999999999999997599998479988999989999999999999746-----896599996966898999999
Q ss_pred -H---HCCCC--CCCH-HHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHH-H-HHCCCCEEEEEEEC
Q ss_conf -4---21745--4202-4545899999986079976999636277302666554335888876-5-31246604899744
Q gi|254780877|r 245 -L---IAGAK--FRGE-FEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLK-P-SLARGELHCIGATT 315 (853)
Q Consensus 245 -l---~ag~~--~rg~-~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LK-P-~LarG~l~~IgaTT 315 (853)
T Consensus 105 ~i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~---~~~~~vLY~L~r~~~~~~~~~~~vI~IsN 181 (394)
T PRK00411 105 EIARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVE---KEGNDVLYSLLRAHEEYPGARIGVIGISS 181 (394)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC---CCCCHHHHHHHHCCCCCCCCCEEEEEEEC
T ss_conf 999995699898778789999999999861669758999965540203---66508999998540226887389999976
Q ss_pred HHHHHHHHHCCHHHHHCC--CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 899999730011132023--111115777678999999978986541496101589999986333202457674778999
Q gi|254780877|r 316 LDEYRKYIEKDPALARRF--QSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDL 393 (853)
Q Consensus 316 ~~Eyrk~iEkD~Al~RRF--q~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDl 393 (853)
T Consensus 182 ~~~~~~~L--dprv~S~l~~~~i~F~PY~~~qL~~IL~~R~~--~af~~gv~~~~~i~~~A~~~a~~~GD---aR~Aldl 254 (394)
T PRK00411 182 DLTFLYIL--DPRVKSVFGPEEIVFPPYTADEIFDILKDRVE--EGFYPGVVSDEVLELIADLTGREHGD---ARVAIDL 254 (394)
T ss_pred CCCHHHHH--HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH--HCCCCCCCCHHHHHHHHHHHHHCCCC---HHHHHHH
T ss_conf 87177664--07775027862898589998999999999998--41455678978999999998550475---8999999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780877|r 394 MDEASAR 400 (853)
Q Consensus 394 lDeA~A~ 400 (853)
T Consensus 255 lr~A~e~ 261 (394)
T PRK00411 255 LRRAGEI 261 (394)
T ss_pred HHHHHHH
T ss_conf 9999999