HHsearch alignment for GI: 254780877 and conserved domain: PRK00440

Probab=99.32  E-value=1.5e-11  Score=112.74  Aligned_cols=197  Identities=22%  Similarity=0.289  Sum_probs=138.5

Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCC
Q ss_conf             69987298533333578999999963367778668952887407779999999873489984445743788731354217
Q gi|254780877|r  169 TEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAG  248 (853)
Q Consensus       169 Te~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag  248 (853)
T Consensus         7 ~eKYRP~~l~di~g~~~~~~~L~~~i~~~~~phlLf~GppG~GKTt~a~~la~~l~~~~~-----~~~~lelnasd----   77 (318)
T PRK00440          7 VEKYRPRSLDEVVGQEEIVERLKSFVKEKNMPHLLFAGPPGTGKTTAALALARELYGEYW-----RENFLELNASD----   77 (318)
T ss_pred             HHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC-----CCCEEEECCCC----
T ss_conf             460198989994196999999999998799866988895998899999999999769864-----34768951645----


Q ss_pred             CCCCC--HHHHHHHHHHHHHHHCC-CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEEEEEEECHHHHHHHH
Q ss_conf             45420--24545899999986079-97699963627730266655433588887653124--660489974489999973
Q gi|254780877|r  249 AKFRG--EFEERLKSLLCEIRSED-GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR--GELHCIGATTLDEYRKYI  323 (853)
Q Consensus       249 ~~~rg--~~e~r~~~i~~~~~~~~-~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar--G~l~~IgaTT~~Eyrk~i  323 (853)
T Consensus        78 --~r~id~vr~~i~~~~~~~~~~~~~~kiiiiDE~d~l~--------~~aq~aL~~~mE~~~~~~~fil~~n--~~~kii  145 (318)
T PRK00440         78 --ERGIDVIRNKIKEFARTAPVGGAPFKIIFLDEADNLT--------SDAQQALRRTMEMYSQTTRFILSCN--YSSKII  145 (318)
T ss_pred             --CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC--------HHHHHHHHHHHHCCCCCCEEEEECC--CCCCCC
T ss_conf             --6671789999999997267789973899986855322--------5567888764310566625886348--833376


Q ss_pred             HCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             0011132023111115777678999999978986541496101589999986333202457674778999999999
Q gi|254780877|r  324 EKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEASA  399 (853)
Q Consensus       324 EkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~A  399 (853)
T Consensus       146 ---~~i~SRc~~i~f~~~~~~~i~~~L~~I~~~----E~i~~~~~~l~~i~~~s~gd------lR~ain~Lq~~~~  208 (318)
T PRK00440        146 ---DPIQSRCAVFRFSPLPKEAVIERLRYIAKN----EGLEITDDALEAIYYVSEGD------MRKAINALQAAAA  208 (318)
T ss_pred             ---CCHHHHHEEEECCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCC------HHHHHHHHHHHHH
T ss_conf             ---155655101115789999999999999998----59998999999999864998------9999999999997