HHsearch alignment for GI: 254780877 and conserved domain: PRK03731

Probab=96.98  E-value=0.02  Score=38.73  Aligned_cols=147  Identities=18%  Similarity=0.259  Sum_probs=72.7

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHCC--CCCHHHCCCEEEEEEHHHHHCCCCCCCH--HHHHHHHHHHHHHHCCCCEE
Q ss_conf             7866895288740777999999987348--9984445743788731354217454202--45458999999860799769
Q gi|254780877|r  199 KNNPVLIGDPGVGKTAIIEGLASRIING--DIPESLKGKRLMALDMGALIAGAKFRGE--FEERLKSLLCEIRSEDGEII  274 (853)
Q Consensus       199 k~n~~lvGe~GvGKtaive~la~~i~~~--~vp~~l~~~~i~~ld~~~l~ag~~~rg~--~e~r~~~i~~~~~~~~~~~i  274 (853)
T Consensus         2 ~~~I~LiG~mGsGKstiGk~LA~~L~~~fiD~D~~Ie~--~~g~sI~eif~~---~Ge~~FR~~E~~~l~~l~~-~-~~-   73 (172)
T PRK03731          2 TQPLFLVGPRGCGKTTVGMALAQALGYRFVDTDLWLQS--TLQMTVAEIVER---EGWAGFRARESAALEAVTA-P-ST-   73 (172)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHH--HHCCCHHHHHHH---HCHHHHHHHHHHHHHHHCC-C-CE-
T ss_conf             99889988999988999999999859997978699998--839899999998---3989999999999998427-8-82-


Q ss_pred             EEECCHHHHCCCCCCC-CCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHH
Q ss_conf             9963627730266655-433588887653124660489974489999973001113202311111577767899999997
Q gi|254780877|r  275 LFIDELHVLVGAGKTD-GAMDASNLLKPSLARGELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGL  353 (853)
Q Consensus       275 lfide~h~~~gaG~~~-g~~Daan~LKP~LarG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl  353 (853)
T Consensus        74 --------VIstGGG~v~~~~n~~~L~---~~g~vv~-L~~~~~~l~~Rl~~~~~~~~--RPll~~~~~~~~i~~l~~~R  139 (172)
T PRK03731         74 --------VVATGGGIILTEENRAFMR---NNGIVIY-LCAPVSVLANRLEADPEEDQ--RPTLTGKPLSEEVAEVLAER  139 (172)
T ss_pred             --------EEEECCCCCCCHHHHHHHH---HCCEEEE-EECCHHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHHHHHHH
T ss_conf             --------8980786426899999999---6899999-97999999999813877898--98788998799999999999


Q ss_pred             HHHHHHHCCCCCCH
Q ss_conf             89865414961015
Q gi|254780877|r  354 KERYEQHHKVRISD  367 (853)
Q Consensus       354 ~~~yE~~H~V~i~d  367 (853)
T Consensus       140 ~~~Y~~~a~~ii~~  153 (172)
T PRK03731        140 DALYREVAHHIIDA  153 (172)
T ss_pred             HHHHHHHCCEEECC
T ss_conf             99999848998879