HHsearch alignment for GI: 254780877 and conserved domain: PRK05917

Probab=98.21  E-value=7e-06  Score=66.78  Aligned_cols=105  Identities=22%  Similarity=0.409  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHH
Q ss_conf             89999999999874101236566512898726786168899999998723776530022447740345320130477112
Q gi|254780877|r  574 SAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGY  653 (853)
Q Consensus       574 ~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGY  653 (853)
T Consensus         3 ~~~We~L~~~i~~~Rl-------~-HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~~~-----------~HPD~   63 (290)
T PRK05917          3 NAAWEALLQRVRDQKV-------P-SAILLHGQDLSNLSQYAYELASLILLESSPEAQYKISQK-----------IHPDI   63 (290)
T ss_pred             CHHHHHHHHHHHCCCC-------C-EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHC-----------CCCCE
T ss_conf             5499999999983996-------6-068768999865999999999998578996168898746-----------89985


Q ss_pred             CC-CCCC-CC---------CCHHHHCCC----CCEEEEHHHHHCCHHHHHHHHHHHHCC
Q ss_conf             03-5667-74---------211322156----410220214414989999999984045
Q gi|254780877|r  654 VG-YEEG-GA---------LTEAVRRHP----YQVVLFDEIEKAHSDVHNILLQVLDDG  697 (853)
Q Consensus       654 vG-~~~g-g~---------Lte~vr~~P----~sVil~DEiEKah~~v~~~llqild~G  697 (853)
T Consensus        64 ~~i~pe~k~~~~~Id~iR~l~~~i~~~p~~g~~KV~IId~Ad~Mn~~AaNALLKtLEEP  122 (290)
T PRK05917         64 HEFFPEGKGRLHSIETPRAIKKQIWIHPYEANYKIYIIHEADRMTLDAISAFLKVLEDP  122 (290)
T ss_pred             EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCC
T ss_conf             99615777887867899999999641864688269997567763899999999973479