HHsearch alignment for GI: 254780877 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.81 E-value=1.5e-06 Score=72.28 Aligned_cols=192 Identities=19% Similarity=0.295 Sum_probs=123.0
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCC------CCCCCHHHHCCC
Q ss_conf 76745948999999999987410123656651289872678616889999999872377653------002244774034
Q gi|254780877|r 567 SKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENS------MIRIDMSEYMEK 640 (853)
Q Consensus 567 ~~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~------lir~dMsey~e~ 640 (853)
T Consensus 16 F~dvVGQ~~vv~~L~nai~~~ri-------~-HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~~I~~- 86 (462)
T PRK06305 16 FSEILGQDAVVTVLKNALRFNRA-------A-HAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICKEISS- 86 (462)
T ss_pred HHHHCCCHHHHHHHHHHHHCCCC-------C-CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHC-
T ss_conf 76604909999999999984997-------6-23430389985999999999999679999888898876688899863-
Q ss_pred CCCCHHHCCCCHHC--------CCCCCCCCCHHHHCCC----CCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEE
Q ss_conf 53201304771120--------3566774211322156----41022021441498999999998404578879997783
Q gi|254780877|r 641 HSVSRLIGSPPGYV--------GYEEGGALTEAVRRHP----YQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVD 708 (853)
Q Consensus 641 ~~vs~LiGappGYv--------G~~~gg~Lte~vr~~P----~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~ 708 (853)
T Consensus 87 -------g~~~DViEiDaAs~~gVddIRel~e~v~~~P~~~~yKVyIIDEvhmLs~~AfNALLKtLEEPP---------- 149 (462)
T PRK06305 87 -------GTSLDVIEIDGASHRGIEDIRQINETVLFTPSKSQYKIYIIDEVHMLTKEAFNSLLKTLEEPP---------- 149 (462)
T ss_pred -------CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHCCC----------
T ss_conf -------899986864355344668999999771008867750599981521179999999999861898----------
Q ss_pred CCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 03315595485126876403267999999999862885772666815862889989999999999999999998579899
Q gi|254780877|r 709 FRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISM 788 (853)
Q Consensus 709 f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l 788 (853)
T Consensus 150 -~~v~FILaTTe--------~------------~KIp~TIlSRCQ-rf~F~~i~~~~I~~~L~-------~I~~~E~--i 198 (462)
T PRK06305 150 -QHVKFFLATTE--------I------------HKIPGTILSRCQ-KMHLKRIPEETIIDKLA-------LIAQQDG--I 198 (462)
T ss_pred -CCEEEEEEECC--------H------------HHCCHHHHHHHH-EEECCCCCHHHHHHHHH-------HHHHHCC--C
T ss_conf -77499998188--------1------------428547876540-23325799999999999-------9999839--9
Q ss_pred EECHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 998899999997089822062157999998
Q gi|254780877|r 789 DFDDQVIDWLSCRGYDPSYGARPLKRVIQR 818 (853)
Q Consensus 789 ~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~ 818 (853)
T Consensus 199 ~~e~~AL~lIA~~a---~GsmRDAlslLDQ 225 (462)
T PRK06305 199 ETSREALLPIARAA---QGSLRDAESLYDY 225 (462)
T ss_pred CCCHHHHHHHHHHC---CCCHHHHHHHHHH
T ss_conf 85999999999985---8958789999999