HHsearch alignment for GI: 254780877 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.82 E-value=1.2e-06 Score=72.93 Aligned_cols=199 Identities=17% Similarity=0.288 Sum_probs=119.1
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC----CCC-----CCCCCHHHH
Q ss_conf 76745948999999999987410123656651289872678616889999999872377----653-----002244774
Q gi|254780877|r 567 SKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDD----ENS-----MIRIDMSEY 637 (853)
Q Consensus 567 ~~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~----~~~-----lir~dMsey 637 (853)
T Consensus 20 f~~liGQ~~~~~~l~n~i~~~~~-------~-~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~c~~i 91 (507)
T PRK06645 20 FAELQGQEVLVKVLSYTILNDRL-------A-GGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTNCISF 91 (507)
T ss_pred HHHHCCCHHHHHHHHHHHHCCCC-------C-CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 65623939999999999973996-------6-347745879978899999999996799988889988888887678998
Q ss_pred CCCCCCCHH-HCCCCHHCCCCCCCCCCHHHHCCC----CCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCC
Q ss_conf 034532013-047711203566774211322156----410220214414989999999984045788799977830331
Q gi|254780877|r 638 MEKHSVSRL-IGSPPGYVGYEEGGALTEAVRRHP----YQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNT 712 (853)
Q Consensus 638 ~e~~~vs~L-iGappGYvG~~~gg~Lte~vr~~P----~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~ 712 (853)
T Consensus 92 ~~~~~~dv~EiDa-as~~gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEepp-----------~~~ 159 (507)
T PRK06645 92 NNHNHPDIIEIDA-ASKTSVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPP-----------PHI 159 (507)
T ss_pred HCCCCCCEEEEEC-CCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCC-----------CCE
T ss_conf 6589998599637-8888889999998635517876743589952142248999999999742786-----------443
Q ss_pred EEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 55954851268764032679999999998628857726668158628899899999999999999999985798999988
Q gi|254780877|r 713 LIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDD 792 (853)
Q Consensus 713 iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~ 792 (853)
T Consensus 160 ~Fi~atte-------------------~-~kip~ti~src-q~f~~~~i~~~~i~~~l~-------~i~~~E--~~~~~~ 209 (507)
T PRK06645 160 IFIFATTE-------------------V-QKIPATIISRC-QRYDLRRLSFEEIFKLLE-------YITKQE--NLKADI 209 (507)
T ss_pred EEEEECCC-------------------H-HHCCHHHHHHC-EEEEEECCCHHHHHHHHH-------HHHHHC--CCCCCH
T ss_conf 89997485-------------------3-64837888543-278754599799999999-------999976--877778
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 99999997089822062157999998
Q gi|254780877|r 793 QVIDWLSCRGYDPSYGARPLKRVIQR 818 (853)
Q Consensus 793 ~~~~~l~~~~~~~~~GaR~l~r~i~~ 818 (853)
T Consensus 210 ~al~~ia~~a~---Gs~RDalslldq 232 (507)
T PRK06645 210 EALRIIAYKSE---GSARDAVSILDQ 232 (507)
T ss_pred HHHHHHHHHCC---CCHHHHHHHHHH
T ss_conf 99999998559---986789999999