HHsearch alignment for GI: 254780877 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.33 E-value=8.7e-11 Score=106.63 Aligned_cols=203 Identities=23% Similarity=0.324 Sum_probs=143.0
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHCCCCCH------------HHCC
Q ss_conf 56998729853333357899999996336777866-8952887407779999999873489984------------4457
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNP-VLIGDPGVGKTAIIEGLASRIINGDIPE------------SLKG 234 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~-~lvGe~GvGKtaive~la~~i~~~~vp~------------~l~~ 234 (853)
T Consensus 6 LyrkyRP~~F~dvvGQ~~v~~~L~nai~~~ri~HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~g 85 (563)
T PRK06674 6 LYRVFRPQKFEDVVGQEHVTKTLQNALLQEKVSHAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLGITNG 85 (563)
T ss_pred HHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 88763899765524809999999999984996503431289986899999999998579999998877668789998558
Q ss_pred --CEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--CC
Q ss_conf --437887313542174542024545899999986079---97699963627730266655433588887653124--66
Q gi|254780877|r 235 --KRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR--GE 307 (853)
Q Consensus 235 --~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar--G~ 307 (853)
T Consensus 86 ~~~DviEiDaasn------~gV--d~IR~i~~~v~~~P~~~~yKV~IIDeah~L--------t~~A~NALLKtLEEPP~~ 149 (563)
T PRK06674 86 SISDVLEIDAASN------NGV--DEIRDIRDKVKFAPSAVEYKVYIIDEVHML--------SIGAFNALLKTLEEPPGH 149 (563)
T ss_pred CCCCEEEECCCCC------CCH--HHHHHHHHHHCCCCCCCCEEEEEEECHHHC--------CHHHHHHHHHHHHCCCCC
T ss_conf 9987798525555------787--999999998264886787379998545637--------999999999986388756
Q ss_pred EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 04899744899999730011132023111115777678999999978986541496101589999986333202457674
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLP 387 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lP 387 (853)
T Consensus 150 viFILaTtep~--ki~---~TI~SRCQrf~F~ri~~~~i~~rL~~I~~~----E~i~~~~~aL~~Ia~~a~GsmRD---- 216 (563)
T PRK06674 150 VIFILATTEPH--KIP---PTIISRCQRFDFRRISVNDIVERLSTVVTN----EGTQVEDEALQIIARAADGGMRD---- 216 (563)
T ss_pred EEEEEECCCHH--HCC---HHHHHHHEEEECCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH----
T ss_conf 49999659947--584---788733103127889999999999999998----49998788999999976997889----
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 77899999999987
Q gi|254780877|r 388 DKAIDLMDEASARV 401 (853)
Q Consensus 388 DKAIDllDeA~A~~ 401 (853)
T Consensus 217 --AlsiLdQ~~s~~ 228 (563)
T PRK06674 217 --ALSLLDQAISFS 228 (563)
T ss_pred --HHHHHHHHHHHC
T ss_conf --999999999715