HHsearch alignment for GI: 254780877 and conserved domain: PRK06835

>PRK06835 DNA replication protein DnaC; Validated.
Probab=96.59  E-value=0.017  Score=39.14  Aligned_cols=118  Identities=24%  Similarity=0.327  Sum_probs=68.8

Q ss_pred             HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCC---CCCCCHHHHHHHHHHH
Q ss_conf             9999963367778668952887407779999999873489984445743788731354217---4542024545899999
Q gi|254780877|r  188 RRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAG---AKFRGEFEERLKSLLC  264 (853)
Q Consensus       188 ~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag---~~~rg~~e~r~~~i~~  264 (853)
T Consensus       173 ~~fi~~F~~~~-~nLlf~G~~G~GKTfLa~~IA~ell~~-------g~sViy~ta~~L~~~l~~~~~~~--~~~~~~~~~  242 (330)
T PRK06835        173 LNFIKNFDKNN-ENLLFYGNTGTGKTFLSNCIAKELLDR-------GKTVIYRTSDELIENLREIRFNN--DNDAPELED  242 (330)
T ss_pred             HHHHHHCCCCC-CCEEEECCCCCCHHHHHHHHHHHHHHC-------CCEEEEEEHHHHHHHHHHHHCCC--CCCHHHHHH
T ss_conf             99987247888-866988999998899999999999987-------99499962999999999975457--644899999


Q ss_pred             HHHHCCCCEEEEECCHHHHCCCCCCCC-CCCHHHHHHHHHCCCCEEEEEEE--CHHHHHHH
Q ss_conf             986079976999636277302666554-33588887653124660489974--48999997
Q gi|254780877|r  265 EIRSEDGEIILFIDELHVLVGAGKTDG-AMDASNLLKPSLARGELHCIGAT--TLDEYRKY  322 (853)
Q Consensus       265 ~~~~~~~~~ilfide~h~~~gaG~~~g-~~Daan~LKP~LarG~l~~IgaT--T~~Eyrk~  322 (853)
T Consensus       243 ~l~~~D---LLIIDDLG~E~---~t~~~~~~Lf~iIN~R~~~~k-~tIITTNl~~~eL~~~  296 (330)
T PRK06835        243 LLINCD---LLIIDDLGTES---ITEFSKTELFNLINKRLLMNK-KMIISTNLSLEELLKT  296 (330)
T ss_pred             HHHHCC---EEEEECCCCCC---CCHHHHHHHHHHHHHHHHCCC-CEEEECCCCHHHHHHH
T ss_conf             996189---89972103455---886899999999999986799-9799889998999998