HHsearch alignment for GI: 254780877 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=97.84 E-value=0.00017 Score=55.43 Aligned_cols=174 Identities=17% Similarity=0.230 Sum_probs=100.7
Q ss_pred HHHHHHHC-CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHH-------------CCC--EEEEEEHHHHHCCCCC
Q ss_conf 99999633-6777866895288740777999999987348998444-------------574--3788731354217454
Q gi|254780877|r 188 RRAIQVLS-RRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESL-------------KGK--RLMALDMGALIAGAKF 251 (853)
Q Consensus 188 ~~~~~iL~-r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l-------------~~~--~i~~ld~~~l~ag~~~ 251 (853)
T Consensus 11 ~~l~~~~~~~r~~HA~L~~G~~G~Gk~~la~~~a~~llC~~-~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~---~~k~- 85 (324)
T PRK06871 11 QQITQTFLQGRGHHALLFKADSGLGTEQLIRALAQWLMCQA-PGDEQPCGQCHSCHLFQAGNHPDFHILEPI---DGKD- 85 (324)
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCC-
T ss_conf 99999998699543787689999789999999999982899-999998888989999973899987998467---8887-
Q ss_pred CCHHHHHHHHHHHHHHHC---CCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCC--EEEEEEECHHHHHHHHHCC
Q ss_conf 202454589999998607---99769996362773026665543358888765312466--0489974489999973001
Q gi|254780877|r 252 RGEFEERLKSLLCEIRSE---DGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGE--LHCIGATTLDEYRKYIEKD 326 (853)
Q Consensus 252 rg~~e~r~~~i~~~~~~~---~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~--l~~IgaTT~~Eyrk~iEkD 326 (853)
T Consensus 86 I~--vd~IR~l~~~~~~~~~~g~~KV~iI~~ae~m~--------~~AaNALLKtLEEPp~~~~fiL~t~~~--~~l---l 150 (324)
T PRK06871 86 IG--VDQVREINEKVSQFAQQGGNKVVYIQGAERLT--------EAAANALLKTLEEPRPNTYFLLQADLS--ASL---L 150 (324)
T ss_pred CC--HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHH--------HHHHHHHHHHHCCCCCCEEEEEEECCC--CCC---C
T ss_conf 88--99999999998646220596699975888857--------999999999833898783899987870--103---2
Q ss_pred HHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 1132023111115777678999999978986541496101589999986333202457674778999999
Q gi|254780877|r 327 PALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDE 396 (853)
Q Consensus 327 ~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDe 396 (853)
T Consensus 151 ~TI~SRCq~~~~~~p~~~~~~~wL~~~~---------~~~~~~~~~al~~~~------g~pl~A~~~~~~ 205 (324)
T PRK06871 151 ATIYSRCQTWLIHVPEEQIALDWLQAQS---------SGEIQEIQTALRINY------GRPLLALTFLEQ 205 (324)
T ss_pred CHHHHCCCCEECCCCCHHHHHHHHHHHC---------CCCHHHHHHHHHHCC------CCHHHHHHHHCC
T ss_conf 4086266120089949999999999746---------887299999999769------987999998687