HHsearch alignment for GI: 254780877 and conserved domain: PRK06964
>PRK06964 DNA polymerase III subunit delta'; Validated.
Probab=97.98 E-value=7e-05 Score=58.62 Aligned_cols=174 Identities=21% Similarity=0.229 Sum_probs=94.2
Q ss_pred HHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC-CCHH------------HCCC--EEEEEEHHHHHCCCCCCCHH-
Q ss_conf 963367778668952887407779999999873489-9844------------4574--37887313542174542024-
Q gi|254780877|r 192 QVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGD-IPES------------LKGK--RLMALDMGALIAGAKFRGEF- 255 (853)
Q Consensus 192 ~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~-vp~~------------l~~~--~i~~ld~~~l~ag~~~rg~~- 255 (853)
T Consensus 14 ~~~~~rl~HA~Lf~Gp~G~Gk~~lA~~~A~~llC~~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~Pe~~~~~~~~~~~~~ 93 (342)
T PRK06964 14 QALRARWPHALLLHGQAGIGKLAFAQHLAQGLLCETPQPNGEPCGTCAACTWFAQGNHPDYRIVRPEALAAEAPGAADDA 93 (342)
T ss_pred HHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCHH
T ss_conf 98068713057657999867999999999998389999888978677778888627999745534002102233321001
Q ss_pred --------------------HHHHHHHHHHHHHC---CCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC--CEEE
Q ss_conf --------------------54589999998607---9976999636277302666554335888876531246--6048
Q gi|254780877|r 256 --------------------EERLKSLLCEIRSE---DGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG--ELHC 310 (853)
Q Consensus 256 --------------------e~r~~~i~~~~~~~---~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG--~l~~ 310 (853)
T Consensus 94 ~~~~~~~~~~~~~~~~~~I~idqiR~l~~~l~~~~~~g~~kVviI~~Ae~mn--------~~aaNalLK~LEEPp~~~~~ 165 (342)
T PRK06964 94 KAADADEGGKKTRAPSKEIKIEQVRALLDFCGVGSHRGGARVVVLYPAEALN--------VAAANALLKTLEEPPPGVVF 165 (342)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHC--------HHHHHHHHHHHCCCCCCEEE
T ss_conf 0111222101235655645499999999997007545884499982778738--------99999999972379878489
Q ss_pred EEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 99744899999730011132023111115777678999999978986541496101589999986333202457674778
Q gi|254780877|r 311 IGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKA 390 (853)
Q Consensus 311 IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKA 390 (853)
T Consensus 166 iL~~~~--~~~ll---pTI~SRcq~~~~~~~~~~~~~~~L~~--------~~v~--~-a~-~lla~a------~G~p~~A 222 (342)
T PRK06964 166 LLVSAR--IDRLL---PTILSRCRQWPMTVPAPEAAAAWLAA--------QGVA--D-AN-ALLAEA------GGAPLAA 222 (342)
T ss_pred EEEECC--HHHCC---HHHHHCCEEECCCCCCHHHHHHHHHH--------CCCC--C-HH-HHHHHC------CCCHHHH
T ss_conf 998699--25483---68876764302899599999999987--------3986--3-99-999880------9998999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780877|r 391 IDLMDE 396 (853)
Q Consensus 391 IDllDe 396 (853)
T Consensus 223 l~l~~~ 228 (342)
T PRK06964 223 LALASD 228 (342)
T ss_pred HHHHCC
T ss_conf 987167