HHsearch alignment for GI: 254780877 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.07 E-value=3.2e-09 Score=93.89 Aligned_cols=203 Identities=23% Similarity=0.261 Sum_probs=135.5
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE-CCCCCCHHHHHHHHHHHHHCCCC----CH--------HHC-
Q ss_conf 56998729853333357899999996336777866895-28874077799999998734899----84--------445-
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLI-GDPGVGKTAIIEGLASRIINGDI----PE--------SLK- 233 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lv-Ge~GvGKtaive~la~~i~~~~v----p~--------~l~- 233 (853)
T Consensus 6 lark~RP~~f~e~vGQ~~v~~~l~nal~~~rl~haylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pcg~C~~C~~i~~g 85 (816)
T PRK07003 6 LARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGVTSQPCGVCRACREIDEG 85 (816)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 77550898576623849999999999970986314751178988888999999998678999998978775557877558
Q ss_pred -CCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHH-HHHHHHCC--C
Q ss_conf -7437887313542174542024545899999986079---976999636277302666554335888-87653124--6
Q gi|254780877|r 234 -GKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASN-LLKPSLAR--G 306 (853)
Q Consensus 234 -~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan-~LKP~Lar--G 306 (853)
T Consensus 86 ~~~d~iEiDaA------S~~~v--d~~r~l~~~~~y~p~~~r~KvyiiDEvHmls~--------~afnalLK-tlEepP~ 148 (816)
T PRK07003 86 RFVDYVEMDAA------SNRGV--DEMAALLERAVYAPVDARFKVYMIDEVHMLTN--------HAFNAMLK-TLEEPPP 148 (816)
T ss_pred CCCCEEEEECC------CCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHCCH--------HHHHHHHH-HHCCCCC
T ss_conf 87754786355------43576--89999998622478667447999841543399--------99999998-4037986
Q ss_pred CEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 60489974489999973001113202311111577767899999997898654149610158999998633320245767
Q gi|254780877|r 307 ELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFL 386 (853)
Q Consensus 307 ~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~l 386 (853)
T Consensus 149 hv~FilaTTd~--~k-~-p~t-ilSRc~~f~l~~~~~~~i~~~l~~i~~~----E~i~~e~~al~lia~~a~GsmRD--- 216 (816)
T PRK07003 149 HVKFILATTDP--QK-I-PVT-VLSRCLQFNLKQMPAGHIVSHLERILGE----ERIAFEPQALRLLARAAQGSMRD--- 216 (816)
T ss_pred CEEEEEECCCH--HH-C-CHH-HHHHHHHCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH---
T ss_conf 64899955880--11-5-288-9877765223679999999999999998----29977999999999976773788---
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 4778999999999875
Q gi|254780877|r 387 PDKAIDLMDEASARVR 402 (853)
Q Consensus 387 PDKAIDllDeA~A~~~ 402 (853)
T Consensus 217 ---alsl~dQaia~~~ 229 (816)
T PRK07003 217 ---ALSLTDQAIAYSA 229 (816)
T ss_pred ---HHHHHHHHHHHCC
T ss_conf ---8859999998469