HHsearch alignment for GI: 254780877 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.29 E-value=1.9e-10 Score=103.95 Aligned_cols=204 Identities=19% Similarity=0.209 Sum_probs=144.5
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHCCCCCH------------HHC
Q ss_conf 356998729853333357899999996336777866-8952887407779999999873489984------------445
Q gi|254780877|r 167 DLTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNP-VLIGDPGVGKTAIIEGLASRIINGDIPE------------SLK 233 (853)
Q Consensus 167 DLTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~-~lvGe~GvGKtaive~la~~i~~~~vp~------------~l~ 233 (853)
T Consensus 4 aLyrkyRP~~F~dvvGQe~i~~~L~nal~~~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~i~~ 83 (557)
T PRK07270 4 ALYRKYRSQTFDEMVGQEVVATTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRDITN 83 (557)
T ss_pred HHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 76766089987671481999999999998599540442108998689999999999957999899998887779999875
Q ss_pred C--CEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHC--CC
Q ss_conf 7--437887313542174542024545899999986079---9769996362773026665543358888765312--46
Q gi|254780877|r 234 G--KRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLA--RG 306 (853)
Q Consensus 234 ~--~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~La--rG 306 (853)
T Consensus 84 g~~~DviEidaa------s~~gV--d~IRei~~~~~~~P~~~~yKV~IIDEah~L--------s~~A~NALLKtLEEPP~ 147 (557)
T PRK07270 84 GSLEDVIEIDAA------SNNGV--DEIRDIRDKSTYAPSRATYKVYIIDEVHML--------STGAFNALLKTLEEPTE 147 (557)
T ss_pred CCCCCEEEECCC------CCCCH--HHHHHHHHHHCCCCCCCCEEEEEECCHHHC--------CHHHHHHHHHHHHCCCC
T ss_conf 899974873477------76788--999999998423877788389997144534--------99999989998528998
Q ss_pred CEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 60489974489999973001113202311111577767899999997898654149610158999998633320245767
Q gi|254780877|r 307 ELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFL 386 (853)
Q Consensus 307 ~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~l 386 (853)
T Consensus 148 ~~vFIL~Ttep--~kIl---~TI~SRCQrf~F~~i~~~~i~~~L~~I~~~----E~i~~~~~aL~~Ia~~a~G~mRd--- 215 (557)
T PRK07270 148 NVVFILATTEL--HKIP---ATILSRVQRFEFKSIKTKAIREHLAWILDK----EGISFEVEALNLIARRAEGGMRD--- 215 (557)
T ss_pred CEEEEEEECCH--HHCC---HHHHHHHHHCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH---
T ss_conf 76999984994--7592---888743000108889999999999999998----39986999999999977996878---
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 477899999999987
Q gi|254780877|r 387 PDKAIDLMDEASARV 401 (853)
Q Consensus 387 PDKAIDllDeA~A~~ 401 (853)
T Consensus 216 ---AlsiLdQ~~s~~ 227 (557)
T PRK07270 216 ---ALSILDQALSLS 227 (557)
T ss_pred ---HHHHHHHHHHCC
T ss_conf ---999999999717