HHsearch alignment for GI: 254780877 and conserved domain: PRK07276
>PRK07276 DNA polymerase III subunit delta'; Validated.
Probab=97.81 E-value=0.00048 Score=51.86 Aligned_cols=120 Identities=20% Similarity=0.278 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHCCCCCCCH-HHCC
Q ss_conf 48999999999987410123656651289872678616889999999872377653--00224477403453201-3047
Q gi|254780877|r 573 QSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENS--MIRIDMSEYMEKHSVSR-LIGS 649 (853)
Q Consensus 573 q~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~--lir~dMsey~e~~~vs~-LiGa 649 (853)
T Consensus 7 Qp~i~~~l~~~i~~~r--------l~HAyLf~G--~~Gk~~~A~~~A~~l~C~~~~~~~pCg~C~~C------~~i~~~~ 70 (290)
T PRK07276 7 QPKLFQRFQTILEQDR--------LNHAYLFSG--DFASFEMALFLAQSLFCEQKEDVLPCGHCRSC------RLIEQGD 70 (290)
T ss_pred HHHHHHHHHHHHHCCC--------CCEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH------HHHHCCC
T ss_conf 8999999999998499--------650542169--86879999999999818999998989889999------9987699
Q ss_pred CCHHCC-CCCCC-CCCHHHH-------CCC----CCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEE
Q ss_conf 711203-56677-4211322-------156----4102202144149899999999840457887999778303315595
Q gi|254780877|r 650 PPGYVG-YEEGG-ALTEAVR-------RHP----YQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIM 716 (853)
Q Consensus 650 ppGYvG-~~~gg-~Lte~vr-------~~P----~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~ 716 (853)
T Consensus 71 hpDv~~i~~~~~~I~vd~IR~l~~~~~~~~~~g~~KV~II~~Ad~mt~~AaNaLLK~LEEPp-----------~~t~~iL 139 (290)
T PRK07276 71 FSDVTVIEPQGQVIKTDTIRELTANFSQSGYEGKRQVFIIKDADKMHVNAANSLLKVIEEPQ-----------SEIYIFL 139 (290)
T ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHHHCCCC-----------CCCEEEE
T ss_conf 98713771677757688999999998445613782799977656529999999999703898-----------8837998
Q ss_pred CCC
Q ss_conf 485
Q gi|254780877|r 717 TSN 719 (853)
Q Consensus 717 TsN 719 (853)
T Consensus 140 lt~ 142 (290)
T PRK07276 140 LTN 142 (290)
T ss_pred EEC
T ss_conf 879