HHsearch alignment for GI: 254780877 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=97.96 E-value=0.0035 Score=44.79 Aligned_cols=195 Identities=16% Similarity=0.214 Sum_probs=117.3
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEE--------EEEEHHHHH
Q ss_conf 85333335789999999633677786-689528874077799999998734899844457437--------887313542
Q gi|254780877|r 176 KLDPVIGRDDEMRRAIQVLSRRTKNN-PVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRL--------MALDMGALI 246 (853)
Q Consensus 176 kLDPVIGRe~EI~~~~~iL~r~~k~n-~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i--------~~ld~~~l~ 246 (853)
T Consensus 2 ~F~~iiGq~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl~~i~P~~~~ 81 (314)
T PRK07399 2 LFANLIGQPLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDLLWVEPTYQH 81 (314)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCC
T ss_conf 83312594999999999998599674487789998329999999999985789999766558751899977886056200
Q ss_pred CCCCCCC-HHH--------------HHHHHHHHHHHHC---CCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC-CC
Q ss_conf 1745420-245--------------4589999998607---997699963627730266655433588887653124-66
Q gi|254780877|r 247 AGAKFRG-EFE--------------ERLKSLLCEIRSE---DGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR-GE 307 (853)
Q Consensus 247 ag~~~rg-~~e--------------~r~~~i~~~~~~~---~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar-G~ 307 (853)
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m--------~~~AaNaLLKtLEEP~~ 153 (314)
T PRK07399 82 QGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETM--------NEAAANALLKTLEEPGN 153 (314)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHC--------CHHHHHHHHHHHCCCCC
T ss_conf 3454557789876530268777879999999999731885688479998897871--------99999999986147878
Q ss_pred EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 04899744899999730011132023111115777678999999978986541496101589999986333202457674
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLP 387 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lP 387 (853)
T Consensus 154 ~~fILit~~~~--~lL---pTI~SRCQ~i~F~~l~~~~i~~~L~~~~~~----~~~~~~~~~l~~~A~Gs---------p 215 (314)
T PRK07399 154 GTLILIAPSPE--SLL---PTIVSRCQIIPFYRLSDEQLEQVLKRLGDN----INEILDHPELLALAQGS---------P 215 (314)
T ss_pred CEEEEEECCHH--HCC---HHHHCCCEEEECCCCCHHHHHHHHHHCCCC----CCCCCCHHHHHHHHCCC---------H
T ss_conf 56999979936--491---466418756338998999999999971664----33102789999881799---------7
Q ss_pred HHHHHHHHH
Q ss_conf 778999999
Q gi|254780877|r 388 DKAIDLMDE 396 (853)
Q Consensus 388 DKAIDllDe 396 (853)
T Consensus 216 G~a~~~~~~ 224 (314)
T PRK07399 216 GAAIANIEQ 224 (314)
T ss_pred HHHHHHHHH
T ss_conf 999999999