HHsearch alignment for GI: 254780877 and conserved domain: PRK07764
>PRK07764 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.21 E-value=6.8e-10 Score=99.37 Aligned_cols=203 Identities=20% Similarity=0.184 Sum_probs=134.2
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC-CEEEECCCCCCHHHHHHHHHHHHHCCCCCH-----------HH-C-
Q ss_conf 569987298533333578999999963367778-668952887407779999999873489984-----------44-5-
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKN-NPVLIGDPGVGKTAIIEGLASRIINGDIPE-----------SL-K- 233 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~-n~~lvGe~GvGKtaive~la~~i~~~~vp~-----------~l-~- 233 (853)
T Consensus 5 LyrkyRP~~F~eviGQe~v~~~L~~Ai~~gri~HAYLFsGprG~GKTt~ARilAkaLNC~~~~~~~PCg~C~sC~~i~~g 84 (775)
T PRK07764 5 LYRRYRPATFAEVVGQEHVTEPLSTALDSGRINHAYLFSGPRGCGKTSSARILARSLNCAQGPTSTPCGVCDSCVALAPG 84 (775)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 66550788766622859999999999981997633762378887888999999999668999998988887637888638
Q ss_pred ---CCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--
Q ss_conf ---7437887313542174542024545899999986079---97699963627730266655433588887653124--
Q gi|254780877|r 234 ---GKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR-- 305 (853)
Q Consensus 234 ---~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar-- 305 (853)
T Consensus 85 ~~~~~DviEiD------AAS~~gV--ddiReL~e~~~y~P~~~ryKVyIIDEaHmls--------~~afNALLKtLEEPP 148 (775)
T PRK07764 85 GPGSLDVVEID------AASHGGV--DDARELRERAFFAPAQSRYRIFIIDEAHMVT--------TAGFNALLKIVEEPP 148 (775)
T ss_pred CCCCCCEEEEC------CCCCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHHC--------HHHHHHHHHHHCCCC
T ss_conf 98888668731------5655688--9999999854768767863599985354407--------999999988622786
Q ss_pred CCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 66048997448999997300111320231111157776789999999789865414961015899999863332024576
Q gi|254780877|r 306 GELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRF 385 (853)
Q Consensus 306 G~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~ 385 (853)
T Consensus 149 ~hvvFIlaTTep--~kip---~TI~SRcq~f~Fr~i~~~~~~~~l~~i~~----~E~i~~~~~al~li~r~~~Gs~RD-- 217 (775)
T PRK07764 149 EHLIFIFATTEP--EKVI---GTIRSRTHHYPFRLVPPGTMRPYLERICA----QEGVVVDDAVLPLVIRAGGGSPRD-- 217 (775)
T ss_pred CCEEEEEECCCH--HHCC---HHHHHHCCCCCCCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHHH--
T ss_conf 462799954873--5471---67764102345266999999999999999----839987989999999982896676--
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 7477899999999987
Q gi|254780877|r 386 LPDKAIDLMDEASARV 401 (853)
Q Consensus 386 lPDKAIDllDeA~A~~ 401 (853)
T Consensus 218 ----alS~ldQl~a~~ 229 (775)
T PRK07764 218 ----TLSVLDQLLAGA 229 (775)
T ss_pred ----HHHHHHHHHHCC
T ss_conf ----899999998404