HHsearch alignment for GI: 254780877 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.02 E-value=0.045 Score=35.84 Aligned_cols=174 Identities=17% Similarity=0.269 Sum_probs=102.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCCC-------------CCCCEEEECCCCCCHHHHHHHHHHHHHCCC--CCH---------H
Q ss_conf 8533333578999999963367-------------778668952887407779999999873489--984---------4
Q gi|254780877|r 176 KLDPVIGRDDEMRRAIQVLSRR-------------TKNNPVLIGDPGVGKTAIIEGLASRIINGD--IPE---------S 231 (853)
Q Consensus 176 kLDPVIGRe~EI~~~~~iL~r~-------------~k~n~~lvGe~GvGKtaive~la~~i~~~~--vp~---------~ 231 (853)
T Consensus 3 ~f~~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i 82 (395)
T PRK07940 3 VWDRLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTV 82 (395)
T ss_pred CCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 70131592999999999998363434433334687660376368998788999999999966999999999878789998
Q ss_pred HCCC--EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHC--CC-CEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 4574--3788731354217454202454589999998607--99-76999636277302666554335888876531246
Q gi|254780877|r 232 LKGK--RLMALDMGALIAGAKFRGEFEERLKSLLCEIRSE--DG-EIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG 306 (853)
Q Consensus 232 l~~~--~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~--~~-~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG 306 (853)
T Consensus 83 ~~g~hpDv~~i~p----~~~~i~---id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m~--------~~a~NalLKtLEEP 147 (395)
T PRK07940 83 LAGTHPDVRVVVP----EGLSIG---VDEVREIVQIAARRPTTGRWRIVVIEDADRLT--------ERAANALLKAVEEP 147 (395)
T ss_pred HCCCCCCEEEEEC----CCCCCC---HHHHHHHHHHHHHCCCCCCCEEEEEECHHHHC--------HHHHHHHHHHHCCC
T ss_conf 7689987189826----877688---99999999998527303795599980778748--------99999999852178
Q ss_pred C---EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 6---048997448999997300111320231111157776789999999789865414961015899999863332
Q gi|254780877|r 307 E---LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNR 379 (853)
Q Consensus 307 ~---l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~r 379 (853)
T Consensus 148 p~~~~fiL~t~~~~~ll------pTI~SRcq~~~f~~~~~~~i~~~L~-------~~~gi--~~~~A~~aA~~s~G 208 (395)
T PRK07940 148 PPRTVWLLCAPSVEDVL------PTIRSRCRHVALRTPSVEAVADVLV-------RRDGV--DPETAQWAARASGG 208 (395)
T ss_pred CCCEEEEEEECCHHHHH------HHHHHHHEECCCCCCCHHHHHHHHH-------HCCCC--CHHHHHHHHHHHCC
T ss_conf 88869998739978744------6887440002379999999999998-------70199--98999999998089