HHsearch alignment for GI: 254780877 and conserved domain: PRK07940

>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.02  E-value=0.045  Score=35.84  Aligned_cols=174  Identities=17%  Similarity=0.269  Sum_probs=102.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCC-------------CCCCEEEECCCCCCHHHHHHHHHHHHHCCC--CCH---------H
Q ss_conf             8533333578999999963367-------------778668952887407779999999873489--984---------4
Q gi|254780877|r  176 KLDPVIGRDDEMRRAIQVLSRR-------------TKNNPVLIGDPGVGKTAIIEGLASRIINGD--IPE---------S  231 (853)
Q Consensus       176 kLDPVIGRe~EI~~~~~iL~r~-------------~k~n~~lvGe~GvGKtaive~la~~i~~~~--vp~---------~  231 (853)
T Consensus         3 ~f~~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i   82 (395)
T PRK07940          3 VWDRLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTV   82 (395)
T ss_pred             CCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf             70131592999999999998363434433334687660376368998788999999999966999999999878789998


Q ss_pred             HCCC--EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHC--CC-CEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             4574--3788731354217454202454589999998607--99-76999636277302666554335888876531246
Q gi|254780877|r  232 LKGK--RLMALDMGALIAGAKFRGEFEERLKSLLCEIRSE--DG-EIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG  306 (853)
Q Consensus       232 l~~~--~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~--~~-~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG  306 (853)
T Consensus        83 ~~g~hpDv~~i~p----~~~~i~---id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m~--------~~a~NalLKtLEEP  147 (395)
T PRK07940         83 LAGTHPDVRVVVP----EGLSIG---VDEVREIVQIAARRPTTGRWRIVVIEDADRLT--------ERAANALLKAVEEP  147 (395)
T ss_pred             HCCCCCCEEEEEC----CCCCCC---HHHHHHHHHHHHHCCCCCCCEEEEEECHHHHC--------HHHHHHHHHHHCCC
T ss_conf             7689987189826----877688---99999999998527303795599980778748--------99999999852178


Q ss_pred             C---EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             6---048997448999997300111320231111157776789999999789865414961015899999863332
Q gi|254780877|r  307 E---LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNR  379 (853)
Q Consensus       307 ~---l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~r  379 (853)
T Consensus       148 p~~~~fiL~t~~~~~ll------pTI~SRcq~~~f~~~~~~~i~~~L~-------~~~gi--~~~~A~~aA~~s~G  208 (395)
T PRK07940        148 PPRTVWLLCAPSVEDVL------PTIRSRCRHVALRTPSVEAVADVLV-------RRDGV--DPETAQWAARASGG  208 (395)
T ss_pred             CCCEEEEEEECCHHHHH------HHHHHHHEECCCCCCCHHHHHHHHH-------HCCCC--CHHHHHHHHHHHCC
T ss_conf             88869998739978744------6887440002379999999999998-------70199--98999999998089