HHsearch alignment for GI: 254780877 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=97.81 E-value=0.00018 Score=55.38 Aligned_cols=163 Identities=18% Similarity=0.255 Sum_probs=97.7
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHH------C-----------CCEEEEEEHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 866895288740777999999987348998444------5-----------74378873135421745420245458999
Q gi|254780877|r 200 NNPVLIGDPGVGKTAIIEGLASRIINGDIPESL------K-----------GKRLMALDMGALIAGAKFRGEFEERLKSL 262 (853)
Q Consensus 200 ~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l------~-----------~~~i~~ld~~~l~ag~~~rg~~e~r~~~i 262 (853)
T Consensus 25 HA~L~~G~~G~Gk~~la~~~a~~llC~~-~~~~~~Cg~C~~C~l~~~~~HPD~~~i~pe~----~~~~I-~--IdqIR~l 96 (334)
T PRK07993 25 HALLIQALPGMGDDALIYALSRYLLCQQ-PQGHKSCGHCRGCQLMQAGTHPDYYTLTPEK----GKSSL-G--VDAVREV 96 (334)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCCCCEEEECCCC----CCCCC-C--HHHHHHH
T ss_conf 4675479999889999999999981899-9999999999789998668999847753422----34559-9--9999999
Q ss_pred HHHHHHC---CCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECC
Q ss_conf 9998607---9976999636277302666554335888876531246604899744899999730011132023111115
Q gi|254780877|r 263 LCEIRSE---DGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCIGATTLDEYRKYIEKDPALARRFQSLLVG 339 (853)
Q Consensus 263 ~~~~~~~---~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~ 339 (853)
T Consensus 97 ~~~~~~~~~~g~~kV~iI~~Ae~m--------n~~AaNaLLKtLEEPp~~t~~iL~t~~~~~l---LpTI~SRCq~~~~~ 165 (334)
T PRK07993 97 TEKLYEHARLGGAKVVWLPDAALL--------TDAAANALLKTLEEPPEKTWFFLACREPARL---LATLRSRCRLHYLA 165 (334)
T ss_pred HHHHHHCCCCCCCEEEEECCHHHH--------CHHHHHHHHHHHCCCCCCEEEEEECCCHHHC---CCHHHHHCCCCCCC
T ss_conf 999843665699479997667775--------9999999998612799884999866985657---23887523041589
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 777678999999978986541496101589999986333202457674778999999
Q gi|254780877|r 340 EPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDE 396 (853)
Q Consensus 340 Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDe 396 (853)
T Consensus 166 ~~~~~~~~~wL~~~---------~~~~~~~~~~al~la~Gs------pl~A~~l~~~ 207 (334)
T PRK07993 166 PPPEQYALTWLSRE---------VTMSQEALLAALRLSAGA------PGAALALLQP 207 (334)
T ss_pred CCCHHHHHHHHHHH---------CCCCHHHHHHHHHHCCCC------HHHHHHHHCC
T ss_conf 97999999999873---------689889999999984998------9999998256