HHsearch alignment for GI: 254780877 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.09 E-value=2.6e-09 Score=94.60 Aligned_cols=204 Identities=26% Similarity=0.288 Sum_probs=132.8
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHC-CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC-C---C--------HHHCC
Q ss_conf 5699872985333335789999999633-67778668952887407779999999873489-9---8--------44457
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLS-RRTKNNPVLIGDPGVGKTAIIEGLASRIINGD-I---P--------ESLKG 234 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~-r~~k~n~~lvGe~GvGKtaive~la~~i~~~~-v---p--------~~l~~ 234 (853)
T Consensus 6 lark~Rp~~f~~~vGQ~~v~~~l~na~~~~r~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g 85 (643)
T PRK07994 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 85 (643)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 77652888666653879999999999982986634874589988888999999999679999999978767768988658
Q ss_pred --CEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--C-CEEEEECCHHHHCCCCCCCCCCCHHH-HHHHHHCC-CC
Q ss_conf --437887313542174542024545899999986079--9-76999636277302666554335888-87653124-66
Q gi|254780877|r 235 --KRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED--G-EIILFIDELHVLVGAGKTDGAMDASN-LLKPSLAR-GE 307 (853)
Q Consensus 235 --~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~--~-~~ilfide~h~~~gaG~~~g~~Daan-~LKP~Lar-G~ 307 (853)
T Consensus 86 ~~~d~~eid------aas~~~v--d~~rel~~~~~y~p~~~r~kvyiidEvhmls--------~~afnalLKtlEePp~h 149 (643)
T PRK07994 86 RFVDLIEID------AASRTKV--EDTRDLLDNVQYAPARGRFKVYLIDEVHMLS--------RHSFNALLKTLEEPPAH 149 (643)
T ss_pred CCCCEEEEE------CCCCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHCC--------HHHHHHHHHHHCCCCHH
T ss_conf 988758863------6777888--9999999844668877853699972210158--------99999999862378610
Q ss_pred EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 04899744899999730011132023111115777678999999978986541496101589999986333202457674
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLP 387 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lP 387 (853)
T Consensus 150 v~filaTT~~--~k~--p~TilSR-C~~f~~~~~~~~~i~~~l~~i~~----~e~i~~~~~al~~ia~~a~gs~rd---- 216 (643)
T PRK07994 150 VKFLLATTDP--QKL--PVTILSR-CLQFHLKALDVEQIRHQLEHILN----EEHIAHEPRALQLLARAADGSLRD---- 216 (643)
T ss_pred CEEEEECCCH--HHC--CHHHHHH-HHHEECCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHHH----
T ss_conf 0899860774--548--4789977-76500166999999999999999----759987889999999974786566----
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 778999999999875
Q gi|254780877|r 388 DKAIDLMDEASARVR 402 (853)
Q Consensus 388 DKAIDllDeA~A~~~ 402 (853)
T Consensus 217 --alsl~dq~i~~~~ 229 (643)
T PRK07994 217 --ALSLTDQAIASGD 229 (643)
T ss_pred --HHHHHHHHHHHCC
T ss_conf --8889999998658