HHsearch alignment for GI: 254780877 and conserved domain: PRK08116

Probab=98.55  E-value=4.2e-07  Score=76.69  Aligned_cols=149  Identities=20%  Similarity=0.314  Sum_probs=87.6

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEHHH
Q ss_conf             89872678616889999999872377653002244774034532013047711203566774211322156410220214
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRRHPYQVVLFDEI  679 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~~P~sVil~DEi  679 (853)
T Consensus       110 GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~~~~~ll~~lk~~~--~~~-~~~~~---~e~l~~l~~--~dLLIiDDl  181 (262)
T PRK08116        110 GLLLWGSPGNGKTYLAAAIANELIEKGVPVVFVNVPELLNRIKSTY--NSE-GKEDE---NEIIRALDN--ADLLILDDL  181 (262)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH--HCC-CCHHH---HHHHHHHHC--CCEEEEEHH
T ss_conf             1899898999899999999999998799399988999999999998--635-61019---999998612--998998322


Q ss_pred             H--HCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEE
Q ss_conf             4--14989999999984045788799977830331559548512687640326799999999986288577266681586
Q gi|254780877|r  680 E--KAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIIL  757 (853)
Q Consensus       680 E--Kah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~  757 (853)
T Consensus       182 G~e~~t~w~~e~lf~IIn~Ry-~---------~~kptIiTTNl~~~eL~~---------------~~~~Ri~sRl~e~~~  236 (262)
T PRK08116        182 GAEKDTEWVREKLYNIIDSRY-R---------KGLPTIFTTNLSLEELKN---------------QYGKRTYSRILEMCT  236 (262)
T ss_pred             CCCCCCHHHHHHHHHHHHHHH-H---------CCCCEEEECCCCHHHHHH---------------HHHHHHHHHHHHCCE
T ss_conf             145698789999999999999-7---------699989987999999999---------------863799999986778


Q ss_pred             CCCCCHHHH-HHHHHHHHHHHHHHH
Q ss_conf             288998999-999999999999999
Q gi|254780877|r  758 FEKLRKEDM-AKIVRIQLGRVLSLI  781 (853)
Q Consensus       758 F~~l~~~~~-~~i~~~~l~~l~~~l  781 (853)
T Consensus       237 ~v~~~G~d~R~~~a~~k~~~~~~~l  261 (262)
T PRK08116        237 PVKNEGKSYRREIAKEKLERLKELL  261 (262)
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf             9985177887999999999999860