HHsearch alignment for GI: 254780877 and conserved domain: PRK08116
>PRK08116 hypothetical protein; Validated.
Probab=97.01 E-value=0.0029 Score=45.45 Aligned_cols=70 Identities=26% Similarity=0.498 Sum_probs=50.3
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 66895288740777999999987348998444574378873135421745--4202454589999998607997699963
Q gi|254780877|r 201 NPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAK--FRGEFEERLKSLLCEIRSEDGEIILFID 278 (853)
Q Consensus 201 n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~--~rg~~e~r~~~i~~~~~~~~~~~ilfid 278 (853)
T Consensus 110 GLll~G~~GtGKThLa~aIa~~l~~~-------g~~V~~~~~~~ll~~lk~~~~~~~~~~~~e~l~~l~~~d---LLIiD 179 (262)
T PRK08116 110 GLLLWGSPGNGKTYLAAAIANELIEK-------GVPVVFVNVPELLNRIKSTYNSEGKEDENEIIRALDNAD---LLILD 179 (262)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC-------CCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC---EEEEE
T ss_conf 18998989998999999999999987-------993999889999999999986356101999999861299---89983
Q ss_pred CH
Q ss_conf 62
Q gi|254780877|r 279 EL 280 (853)
Q Consensus 279 e~ 280 (853)
T Consensus 180 Dl 181 (262)
T PRK08116 180 DL 181 (262)
T ss_pred HH
T ss_conf 22