HHsearch alignment for GI: 254780877 and conserved domain: PRK08181

Probab=97.96  E-value=1.2e-05  Score=64.93  Aligned_cols=102  Identities=18%  Similarity=0.369  Sum_probs=67.2

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHC-CCCCEEEEHH
Q ss_conf             898726786168899999998723776530022447740345320130477112035667742113221-5641022021
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRR-HPYQVVLFDE  678 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~-~P~sVil~DE  678 (853)
T Consensus       108 Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~~~L~~~L~~a~~~~------------~~~~~~~~l~~~dLLIiDe  175 (269)
T PRK08181        108 NLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARREL------------QLESAIAKLDKFDLLILDD  175 (269)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCC------------CHHHHHHHHHCCCEEEEHH
T ss_conf             0899899998788999999999998799399978999999999977558------------3999999974446012201


Q ss_pred             HHHC--CHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHH
Q ss_conf             4414--989999999984045788799977830331559548512687
Q gi|254780877|r  679 IEKA--HSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEY  724 (853)
Q Consensus       679 iEKa--h~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~  724 (853)
T Consensus       176 ~G~~~~~~~~~~~lf~lI~~Ry-----e~------~S~IITSn~~~~~  212 (269)
T PRK08181        176 LAYVTKDQAETSVLFELISARY-----ER------RSILITANQPFGE  212 (269)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH-----CC------CCEEEECCCCHHH
T ss_conf             0566799899999999999985-----78------8889988999778