HHsearch alignment for GI: 254780877 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.29 E-value=1.5e-10 Score=104.71 Aligned_cols=204 Identities=24% Similarity=0.301 Sum_probs=145.5
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHCCCCCHH------------HCC
Q ss_conf 56998729853333357899999996336777866-89528874077799999998734899844------------457
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNP-VLIGDPGVGKTAIIEGLASRIINGDIPES------------LKG 234 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~-~lvGe~GvGKtaive~la~~i~~~~vp~~------------l~~ 234 (853)
T Consensus 4 LarKYRP~~F~evIGQe~iv~~L~nAi~~~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i~~g 83 (523)
T PRK08451 4 LALKYRPKHFDELIGQESVSKTLSLALDNNRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAALEG 83 (523)
T ss_pred HHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 44420899654404949999999999985996715875789986889999999999759999998988878889998648
Q ss_pred C--EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHC---CCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--CC
Q ss_conf 4--3788731354217454202454589999998607---997699963627730266655433588887653124--66
Q gi|254780877|r 235 K--RLMALDMGALIAGAKFRGEFEERLKSLLCEIRSE---DGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR--GE 307 (853)
Q Consensus 235 ~--~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~---~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar--G~ 307 (853)
T Consensus 84 ~hpDViEiD------aasn~g--ID~IReLie~~~~~P~~gryKV~IIDEah~L--------t~~A~NALLKTLEEPP~~ 147 (523)
T PRK08451 84 RHIDIIEMD------AASNRG--IDDIRNLIEQTKYKPSMARFKIFIIDEVHML--------TKEAFNALLKTLEEPPSY 147 (523)
T ss_pred CCCCEEEEC------CCCCCC--HHHHHHHHHHHCCCCCCCCEEEEEEECCCCC--------CHHHHHHHHHHCCCCCCC
T ss_conf 999855105------533368--9999999997235886797279998260304--------899999999970389878
Q ss_pred EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 04899744899999730011132023111115777678999999978986541496101589999986333202457674
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLP 387 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lP 387 (853)
T Consensus 148 vvFILaTTep--~KLp---~TIlSRCQ~f~Fk~I~~~~I~~~L~~I~~~----E~i~~e~~AL~~IA~~a~GslRD---- 214 (523)
T PRK08451 148 VKFILATTDP--LKLP---ATILSRTQHFRFKQIPQNSIISHLKTILNK----EGVSYEPEALEILARSGSGSLRD---- 214 (523)
T ss_pred CEEEEECCCH--HHCH---HHHHHHHHCCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH----
T ss_conf 3799975994--7684---888742031103379999999999999998----39987999999999977894868----
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 778999999999875
Q gi|254780877|r 388 DKAIDLMDEASARVR 402 (853)
Q Consensus 388 DKAIDllDeA~A~~~ 402 (853)
T Consensus 215 --alslLdQ~i~~~~ 227 (523)
T PRK08451 215 --TLTLLDQAIIFCK 227 (523)
T ss_pred --HHHHHHHHHHHCC
T ss_conf --9879999998479