HHsearch alignment for GI: 254780877 and conserved domain: PRK08727

Probab=98.45  E-value=2.2e-05  Score=62.70  Aligned_cols=169  Identities=22%  Similarity=0.320  Sum_probs=100.6

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEHHH
Q ss_conf             89872678616889999999872377653002244774034532013047711203566774211322156410220214
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRRHPYQVVLFDEI  679 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~~P~sVil~DEi  679 (853)
T Consensus        43 ~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~~~~---------~~~~~---------l~~l--e~~~ll~iDDi  102 (233)
T PRK08727         43 WLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQAAAG---------RLRDA---------LEAL--EGRSLVALDGV  102 (233)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHH---------HHHHH---------HHHH--CCCCEEEEECC
T ss_conf             8999899999889999999999982799728844788532---------02567---------7531--03897898550


Q ss_pred             HHCC--HH----HHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC
Q ss_conf             4149--89----99999998404578879997783033155954851268764032679999999998628857726668
Q gi|254780877|r  680 EKAH--SD----VHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLD  753 (853)
Q Consensus       680 EKah--~~----v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid  753 (853)
T Consensus       103 d~i~g~~~~e~aLFhL~N~~~~~~--------------~~ll~ts~~~P~~l~----------------~~l~DL~SRL~  152 (233)
T PRK08727        103 DSIAGQREDEVALFDFHNRARAAG--------------ITLLYTARQMPDGLA----------------LVLPDLRSRLS  152 (233)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHCC--------------CEEEEECCCCHHHHC----------------CCHHHHHHHHH
T ss_conf             112698279999999999998619--------------838997798956623----------------10021999996


Q ss_pred             --CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHH----------HH
Q ss_conf             --158628899899999999999999999985798999988999999970898220621579999987----------33
Q gi|254780877|r  754 --EIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQRY----------IQ  821 (853)
Q Consensus       754 --~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~~----------i~  821 (853)
T Consensus       153 ~~~~~~l~~~dD~~~~~iL~~-------~a~~rgl~--l~~~V~~Yll~r~-~R~~--~~l~~~l~~LD~~SL~~kr~iT  220 (233)
T PRK08727        153 QCIRIGLPVLDDVARAAVLRD-------RAQRRGLA--LDEAAIDWLLTHG-EREL--AGLVALLDRLDRESLAAKRRIT  220 (233)
T ss_pred             CCCEEEECCCCHHHHHHHHHH-------HHHHCCCC--CCHHHHHHHHHHC-CCCH--HHHHHHHHHHHHHHHHCCCCCC
T ss_conf             692288578897999999999-------99986999--9989999999856-8899--9999999999999998089888


Q ss_pred             HHHHHHHHC
Q ss_conf             499999970
Q gi|254780877|r  822 NPLAERVLS  830 (853)
Q Consensus       822 ~~la~~il~  830 (853)
T Consensus       221 ip~vk~vL~  229 (233)
T PRK08727        221 VPFLRRVLE  229 (233)
T ss_pred             HHHHHHHHH
T ss_conf             999999997