HHsearch alignment for GI: 254780877 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=98.57 E-value=9e-07 Score=73.99 Aligned_cols=185 Identities=17% Similarity=0.208 Sum_probs=107.9
Q ss_pred HHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHCCCCCHHHC-------------CCEEEEEEHHHHHCCCC
Q ss_conf 89999999633677786-68952887407779999999873489984445-------------74378873135421745
Q gi|254780877|r 185 DEMRRAIQVLSRRTKNN-PVLIGDPGVGKTAIIEGLASRIINGDIPESLK-------------GKRLMALDMGALIAGAK 250 (853)
Q Consensus 185 ~EI~~~~~iL~r~~k~n-~~lvGe~GvGKtaive~la~~i~~~~vp~~l~-------------~~~i~~ld~~~l~ag~~ 250 (853)
T Consensus 11 ~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~~~i~~g~HPD~~~i~~--~~~~~~~k 88 (319)
T PRK08769 11 RAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTRQLIAAGTHPDLQLVSF--IPNRTGDK 88 (319)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEC--CCCCCCCC
T ss_conf 9999999999769942068758999878999999999998379979765433889996689989687753--44445431
Q ss_pred CCCHH-HHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEEEEEEECHHHHHHHHH
Q ss_conf 42024-545899999986079---97699963627730266655433588887653124--6604899744899999730
Q gi|254780877|r 251 FRGEF-EERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR--GELHCIGATTLDEYRKYIE 324 (853)
Q Consensus 251 ~rg~~-e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar--G~l~~IgaTT~~Eyrk~iE 324 (853)
T Consensus 89 ~k~~I~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~m--------n~~AaNalLK~LEEPp~~~~~iL~~~~~--~~l-- 156 (319)
T PRK08769 89 LRTEIVIEQVREISQKLALTPQYGIAQVVIVDPADAI--------NRSACNALLKTLEEPSPGRYLWLISAQP--ARL-- 156 (319)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHC--------CHHHHHHHHHHHCCCCCCEEEEEEECCH--HHC--
T ss_conf 1234869999999999613720279569998066752--------8999999999822799884899986993--658--
Q ss_pred CCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0111320231111157776789999999789865414961015899999863332024576747789999999998
Q gi|254780877|r 325 KDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEASAR 400 (853)
Q Consensus 325 kD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~A~ 400 (853)
T Consensus 157 -l~TI~SRCq~~~~~~p~~~~~~~~L~~~--------g--~~~~~a~~~l~~a------~g~p~~A~~~~~~~~~~ 215 (319)
T PRK08769 157 -PATIRSRCQRLEFKLPPAHEALAWLLSQ--------G--VSERAAQEALDAA------RGHPGLAAQWLREDGLA 215 (319)
T ss_pred -CHHHHHCCEEECCCCCCHHHHHHHHHHC--------C--CCHHHHHHHHHHH------CCCHHHHHHHHCCCCHH
T ss_conf -2477648501118996999999999975--------9--9918999999982------79968999984367277