HHsearch alignment for GI: 254780877 and conserved domain: PRK08903

Probab=98.22  E-value=0.00015  Score=56.02  Aligned_cols=181  Identities=15%  Similarity=0.188  Sum_probs=108.6

Q ss_pred             CCCHHHHHHHHH-HHHCCCCCCCEE-EECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHH
Q ss_conf             333578999999-963367778668-952887407779999999873489984445743788731354217454202454
Q gi|254780877|r  180 VIGRDDEMRRAI-QVLSRRTKNNPV-LIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEE  257 (853)
Q Consensus       180 VIGRe~EI~~~~-~iL~r~~k~n~~-lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~  257 (853)
T Consensus        21 v~g~n~~~~~~l~~~~~~~~~~~~l~i~G~~G~GKTHLl~a~~~~~~~~~-------~~~~yl~~~~~------------   81 (227)
T PRK08903         21 IAGENAELVTRLRELAAGPVADRFFYLWGEAGSGRSHLLQALVAAASEGG-------KNARYLDPASP------------   81 (227)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-------CCEEEECCCCC------------
T ss_conf             57775999999998874388786699989999988899999999998069-------97499651104------------


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEE-EEECHHHHHHHHHCCHHHHHCC---
Q ss_conf             589999998607997699963627730266655433588887653124660489-9744899999730011132023---
Q gi|254780877|r  258 RLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCI-GATTLDEYRKYIEKDPALARRF---  333 (853)
Q Consensus       258 r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~I-gaTT~~Eyrk~iEkD~Al~RRF---  333 (853)
T Consensus        82 --~~~~~~~~~---~d~l~iDDi~~i~--~~~q--~~lF~l~N~~~~~~~~~ll~s~~~~p~~l~-~~~--DL~SRl~~g  149 (227)
T PRK08903         82 --LLAFDFDPR---AELYAVDDVERLD--DAQQ--IALFNLFNRVRAHGKTALLVAGPAAPLALD-VRE--DLRTRLGWG  149 (227)
T ss_pred             --HHHHHHHHC---CCEEEEECCCCCC--CHHH--HHHHHHHHHHHHCCCCEEEECCCCCHHHCC-CCH--HHHHHHHCC
T ss_conf             --577742001---8989996411489--5699--999999999997299489971899712012-008--999999389


Q ss_pred             CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             11111577767899999997898654149610158999998633320245767477899999999
Q gi|254780877|r  334 QSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEAS  398 (853)
Q Consensus       334 q~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~  398 (853)
T Consensus       150 l~~~i~~pdde~~~~iL~~~a~----~rgl~l~~~v~~yl~~r~~R~~~~---L~~~l~~Ld~~s  207 (227)
T PRK08903        150 LVYEVKPLSDEDKIAALKAAAA----ERGLQLADEVPDYLLTHFRRDMPS---LMALLDALDRYS  207 (227)
T ss_pred             CEEEEECCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHCCCHHH---HHHHHHHHHHHH
T ss_conf             7389979799999999999999----629999889999999983478999---999999999999