HHsearch alignment for GI: 254780877 and conserved domain: PRK08939

Probab=98.05  E-value=5.8e-05  Score=59.30  Aligned_cols=127  Identities=24%  Similarity=0.367  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHC
Q ss_conf             99999999998741012365665128987267861688999999987237765300224477403453201304771120
Q gi|254780877|r  575 AAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYV  654 (853)
Q Consensus       575 ~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYv  654 (853)
T Consensus       139 ~a~~~a~~F~~~y~-----~~~~~kGlyl~G~~G~GKTyL~~aian~La~~g~~v~~v~~p~~~~~lK~s--~~d-----  206 (306)
T PRK08939        139 DALMAALDFLEAYK-----PGEKVKGLYLYGDFGVGKTYLLAAIANELAKKGVSSTLVHFPEFIRELKNA--ISD-----  206 (306)
T ss_pred             HHHHHHHHHHHHHC-----CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH--HCC-----
T ss_conf             99999999999737-----698887788989999989999999999999869929998759999999998--648-----


Q ss_pred             CCCCCCCCCHHHHCCCCCEEEEHHH--HHCCHHHHHHHHH-HHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHC
Q ss_conf             3566774211322156410220214--4149899999999-84045788799977830331559548512687640
Q gi|254780877|r  655 GYEEGGALTEAVRRHPYQVVLFDEI--EKAHSDVHNILLQ-VLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIE  727 (853)
Q Consensus       655 G~~~gg~Lte~vr~~P~sVil~DEi--EKah~~v~~~llq-ild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~  727 (853)
T Consensus       207 --~s~~~~i~~~k~~~--vLiLDDiGaE~~t~W~rd~vl~~IL~-~Rm~~---------~lPTffTSN~~~~eLe~  268 (306)
T PRK08939        207 --GSVKEKIDAVKEAP--VLMLDDIGAEQMSSWVRDEVLGVILQ-YRMQE---------ELPTFFTSNFDFDELEH  268 (306)
T ss_pred             --CCHHHHHHHHHCCC--EEEEECCCCCCCCHHHHHHHHHHHHH-HHHHC---------CCCEEEECCCCHHHHHH
T ss_conf             --98899999984499--89984446542677789989999999-99974---------99979977999999999