HHsearch alignment for GI: 254780877 and conserved domain: PRK09862
>PRK09862 putative ATP-dependent protease; Provisional.
Probab=97.99 E-value=0.0005 Score=51.69 Aligned_cols=114 Identities=25% Similarity=0.449 Sum_probs=66.1
Q ss_pred CCCCCCCHHHHHHHHHHHH-CCCCCCCEEEECCCCCCHHHHHHHHHH--------------HH--HCCCCC-HHHCCCEE
Q ss_conf 8533333578999999963-367778668952887407779999999--------------87--348998-44457437
Q gi|254780877|r 176 KLDPVIGRDDEMRRAIQVL-SRRTKNNPVLIGDPGVGKTAIIEGLAS--------------RI--INGDIP-ESLKGKRL 237 (853)
Q Consensus 176 kLDPVIGRe~EI~~~~~iL-~r~~k~n~~lvGe~GvGKtaive~la~--------------~i--~~~~vp-~~l~~~~i 237 (853)
T Consensus 189 D~~dv~Gq~~-akraleIAAAGgH--nlLl~GpPG~GKTMlA~rlp~ILPpLt~~e~lEv~~I~Svag~~~~~~~~~~rP 265 (506)
T PRK09862 189 DLSDVVGQEQ-GKRGLEITAAGGH--NLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRP 265 (506)
T ss_pred CHHHHCCCHH-HHHHHHHHHCCCC--CEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 7565369799-9999999744688--659876999459899977512389989899999999998718987777546685
Q ss_pred -----EEEEHHHHHCCCCC--CCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf -----88731354217454--20245458999999860799769996362773026665543358888765312466048
Q gi|254780877|r 238 -----MALDMGALIAGAKF--RGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHC 310 (853)
Q Consensus 238 -----~~ld~~~l~ag~~~--rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~ 310 (853)
T Consensus 266 fR~PHHs~S~~aliGGG~~~~PG-----------EISLAH-~GVLFLDElpEF--------~r~vLe~LRqPLE~g~I~I 325 (506)
T PRK09862 266 FRSPHHSASLTAMVGGGAIPGPG-----------EISLAH-NGVLFLDELPEF--------ERRTLDALREPIESGQIHL 325 (506)
T ss_pred EECCCCCCCHHHHHCCCCCCCCC-----------CEEECC-CCEEEECCHHCC--------CHHHHHHHHHHHCCCEEEE
T ss_conf 03788765476663799999997-----------222135-757884550006--------8889998776224775999
Q ss_pred EE
Q ss_conf 99
Q gi|254780877|r 311 IG 312 (853)
Q Consensus 311 Ig 312 (853)
T Consensus 326 sR 327 (506)
T PRK09862 326 SR 327 (506)
T ss_pred EE
T ss_conf 96