HHsearch alignment for GI: 254780877 and conserved domain: PRK10365

>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=99.52  E-value=4e-11  Score=109.35  Aligned_cols=220  Identities=19%  Similarity=0.286  Sum_probs=161.7

Q ss_pred             HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHC
Q ss_conf             74594899999999998741012365665128987267861688999999987237765300224477403453201304
Q gi|254780877|r  569 SVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIG  648 (853)
Q Consensus       569 ~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiG  648 (853)
T Consensus       140 ~liG~S~am~~v~~~i~~~----A~s~~p---VLI~GE~GTGK~~~Ar~IH~~S~r~~~pfv~vnC~~l~~~l~eseLFG  212 (441)
T PRK10365        140 GMVGKSPAMQHLLSEIALV----APSEAT---VLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFG  212 (441)
T ss_pred             CCEECCHHHHHHHHHHHHH----HCCCCC---EEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCC
T ss_conf             8666899999999999998----488994---899899981099999999965787789807987898984555898617


Q ss_pred             CCCHHCCCCCCCCCCHHHHC-------CCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHH
Q ss_conf             77112035667742113221-------56410220214414989999999984045788799977830331559548512
Q gi|254780877|r  649 SPPGYVGYEEGGALTEAVRR-------HPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLG  721 (853)
Q Consensus       649 appGYvG~~~gg~Lte~vr~-------~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G  721 (853)
T Consensus       213 ~~~ga--------ftga~~~~~g~~~~A~gGTLfLdeI~~l~~~~Q~kLl~~l~~~~~~~~g~~~~~~~d~RiIaat~~~  284 (441)
T PRK10365        213 HEKGA--------FTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRD  284 (441)
T ss_pred             CCCCC--------CCCCCCCCCCCEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCC
T ss_conf             75568--------7896534689877889982550231529999999999877752100058873441363799837889


Q ss_pred             HHHHHCCHHHHHHHHHHHH-HHHCCHHHHCCCCC-EEECCCCC--HHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHH
Q ss_conf             6876403267999999999-86288577266681-58628899--89999999999999999998579899998899999
Q gi|254780877|r  722 AEYLIEDGDSVHDKVMGIV-RSAFKPEFLNRLDE-IILFEKLR--KEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDW  797 (853)
Q Consensus       722 ~~~~~~~~~~~~~~~~~~l-~~~f~peflnRid~-iv~F~~l~--~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~  797 (853)
T Consensus       285 --------------l~~~v~~g~Fr~dLy~rL~~~~i~lPpLReR~eDI~~L~~~fl~~~~~~~~~--~~~~~s~~a~~~  348 (441)
T PRK10365        285 --------------LAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRK--AVKGFTPQAMDL  348 (441)
T ss_pred             --------------HHHHHHCCCCHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC--CCCCCCHHHHHH
T ss_conf             --------------9999881982589998860111378260006200999999999999998499--988889999999


Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             997089822062157999998733
Q gi|254780877|r  798 LSCRGYDPSYGARPLKRVIQRYIQ  821 (853)
Q Consensus       798 l~~~~~~~~~GaR~l~r~i~~~i~  821 (853)
T Consensus       349 L~~--y~WPGNvREL~n~iera~~  370 (441)
T PRK10365        349 LIH--YDWPGNIRELENAVERAVV  370 (441)
T ss_pred             HHC--CCCCCHHHHHHHHHHHHHH
T ss_conf             970--9999899999999999999