HHsearch alignment for GI: 254780877 and conserved domain: PRK10536
>PRK10536 hypothetical protein; Provisional.
Probab=95.82 E-value=0.024 Score=38.10 Aligned_cols=138 Identities=20% Similarity=0.302 Sum_probs=69.4
Q ss_pred HHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 66178667751000000012355477674594899999999998741012365665128987267861688999999987
Q gi|254780877|r 542 RWTGIPVDKMLESDREKFLRIETEISKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARL 621 (853)
Q Consensus 542 ~~TGIPv~kl~~~E~ekLl~l~~~l~~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~ 621 (853)
T Consensus 38 ~~~~~~~~~~~~~~~~~-----~pi~pkt~~Q~~yi~~i~~-------------~~i--vf~~GpAGTGKT~lA~a~Al~ 97 (262)
T PRK10536 38 QMGGVEAIGMARDSRDT-----SPILARNEAQLHYLKAIES-------------KQL--IFATGEAGCGKTWISAAKAAE 97 (262)
T ss_pred HHCCCCHHHHHCCCCCC-----CCCCCCCHHHHHHHHHHHH-------------CCE--EEEECCCCCCHHHHHHHHHHH
T ss_conf 84483314330267889-----9867898649999999861-------------983--999899987589999999999
Q ss_pred HCCCCCCCCCCCHHHHCCCCCCCHHHCCCCH-HCCCCCC---CCCCHHHHCCCCCEEEEHHHHHCCHH-HHHHHHHHHHC
Q ss_conf 2377653002244774034532013047711-2035667---74211322156410220214414989-99999998404
Q gi|254780877|r 622 LFDDENSMIRIDMSEYMEKHSVSRLIGSPPG-YVGYEEG---GALTEAVRRHPYQVVLFDEIEKAHSD-VHNILLQVLDD 696 (853)
Q Consensus 622 lf~~~~~lir~dMsey~e~~~vs~LiGappG-YvG~~~g---g~Lte~vr~~P~sVil~DEiEKah~~-v~~~llqild~ 696 (853)
T Consensus 98 ~l~~~~---------------~~kIIltRP~V~~ge~lGfLPGdl~EK~--~Pyl~Pi~D~L~~~lg~~~~~~~~~~-e~ 159 (262)
T PRK10536 98 ALIHKD---------------VDRIIVTRPVLQADEDLGFLPGDIAEKF--APYFRPVYDVLVRRLGASFMQYCLRP-EI 159 (262)
T ss_pred HHHHCC---------------CCEEEEECCCCCCCCCCCCCCCCHHHHH--HHHHHHHHHHHHHHHCHHHHHHHHHH-HC
T ss_conf 998588---------------8689996678756766676989879988--78887899999999685999999873-05
Q ss_pred CEEE---CCCCCEEECCCCEEEEC
Q ss_conf 5788---79997783033155954
Q gi|254780877|r 697 GRLT---DSQGRTVDFRNTLIIMT 717 (853)
Q Consensus 697 G~lt---d~~G~~v~f~n~iii~T 717 (853)
T Consensus 160 G~Iei~PlafmRGrTf~na~IIvD 183 (262)
T PRK10536 160 GKVEIAPFAYMRGRTFENAVVILD 183 (262)
T ss_pred CCEEEEEHHHHCCCCCCCEEEEEE
T ss_conf 948998758744775144289984