HHsearch alignment for GI: 254780877 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=99.59 E-value=1.2e-11 Score=113.74 Aligned_cols=224 Identities=20% Similarity=0.278 Sum_probs=163.3
Q ss_pred HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHC
Q ss_conf 74594899999999998741012365665128987267861688999999987237765300224477403453201304
Q gi|254780877|r 569 SVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIG 648 (853)
Q Consensus 569 ~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiG 648 (853)
T Consensus 139 ~liG~S~~m~~v~~~i~~~----a~~~~pV---LI~GE~GTGK~~~Ar~IH~~S~r~~~pfi~vnC~~~~~~~~e~eLFG 211 (469)
T PRK10923 139 DIIGEAPAMQDVFRIIGRL----SRSSISV---LINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFG 211 (469)
T ss_pred CCEECCHHHHHHHHHHHHH----HCCCCCE---EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHC
T ss_conf 6546899999999999998----5889978---99898982699999999974887799957876788997789999708
Q ss_pred CCCHH-CCCCC--CCCCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHH
Q ss_conf 77112-03566--7742113221564102202144149899999999840457887999778303315595485126876
Q gi|254780877|r 649 SPPGY-VGYEE--GGALTEAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYL 725 (853)
Q Consensus 649 appGY-vG~~~--gg~Lte~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~ 725 (853)
T Consensus 212 ~~~gaf~ga~~~~~g~~----e~a~~GTLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~g~~~~~~~d~RiIaat~~~---- 283 (469)
T PRK10923 212 HEKGAFTGANTIRQGRF----EQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQN---- 283 (469)
T ss_pred CCCCCCCCCCCCCCCCH----HHCCCCCEEHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECCCC----
T ss_conf 76678788642458736----6438992656636648999999999998559378579985122143799707879----
Q ss_pred HCCHHHHHHHHHH-HHHHHCCHHHHCCCCC-EEECCCCCH--HHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHC
Q ss_conf 4032679999999-9986288577266681-586288998--99999999999999999985798999988999999970
Q gi|254780877|r 726 IEDGDSVHDKVMG-IVRSAFKPEFLNRLDE-IILFEKLRK--EDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCR 801 (853)
Q Consensus 726 ~~~~~~~~~~~~~-~l~~~f~peflnRid~-iv~F~~l~~--~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~ 801 (853)
T Consensus 284 ----------L~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~L~~~fl~~~~~~~~--~~~~~~s~~a~~~L~~- 350 (469)
T PRK10923 284 ----------LEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG--VEAKLLHPETEAALTR- 350 (469)
T ss_pred ----------HHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHHHHHHC-
T ss_conf ----------999866081779999864424015846544653499999999999999859--9978789999999974-
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q ss_conf 89822062157999998733
Q gi|254780877|r 802 GYDPSYGARPLKRVIQRYIQ 821 (853)
Q Consensus 802 ~~~~~~GaR~l~r~i~~~i~ 821 (853)
T Consensus 351 -y~WPGNvrEL~n~ier~~~ 369 (469)
T PRK10923 351 -LAWPGNVRQLENTCRWLTV 369 (469)
T ss_pred -CCCCCHHHHHHHHHHHHHH
T ss_conf -9999879999999999998