HHsearch alignment for GI: 254780877 and conserved domain: PRK10923

>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=99.59  E-value=1.2e-11  Score=113.74  Aligned_cols=224  Identities=20%  Similarity=0.278  Sum_probs=163.3

Q ss_pred             HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHC
Q ss_conf             74594899999999998741012365665128987267861688999999987237765300224477403453201304
Q gi|254780877|r  569 SVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIG  648 (853)
Q Consensus       569 ~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiG  648 (853)
T Consensus       139 ~liG~S~~m~~v~~~i~~~----a~~~~pV---LI~GE~GTGK~~~Ar~IH~~S~r~~~pfi~vnC~~~~~~~~e~eLFG  211 (469)
T PRK10923        139 DIIGEAPAMQDVFRIIGRL----SRSSISV---LINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFG  211 (469)
T ss_pred             CCEECCHHHHHHHHHHHHH----HCCCCCE---EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHC
T ss_conf             6546899999999999998----5889978---99898982699999999974887799957876788997789999708


Q ss_pred             CCCHH-CCCCC--CCCCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHH
Q ss_conf             77112-03566--7742113221564102202144149899999999840457887999778303315595485126876
Q gi|254780877|r  649 SPPGY-VGYEE--GGALTEAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYL  725 (853)
Q Consensus       649 appGY-vG~~~--gg~Lte~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~  725 (853)
T Consensus       212 ~~~gaf~ga~~~~~g~~----e~a~~GTLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~g~~~~~~~d~RiIaat~~~----  283 (469)
T PRK10923        212 HEKGAFTGANTIRQGRF----EQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQN----  283 (469)
T ss_pred             CCCCCCCCCCCCCCCCH----HHCCCCCEEHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECCCC----
T ss_conf             76678788642458736----6438992656636648999999999998559378579985122143799707879----


Q ss_pred             HCCHHHHHHHHHH-HHHHHCCHHHHCCCCC-EEECCCCCH--HHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHC
Q ss_conf             4032679999999-9986288577266681-586288998--99999999999999999985798999988999999970
Q gi|254780877|r  726 IEDGDSVHDKVMG-IVRSAFKPEFLNRLDE-IILFEKLRK--EDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCR  801 (853)
Q Consensus       726 ~~~~~~~~~~~~~-~l~~~f~peflnRid~-iv~F~~l~~--~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~  801 (853)
T Consensus       284 ----------L~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~L~~~fl~~~~~~~~--~~~~~~s~~a~~~L~~-  350 (469)
T PRK10923        284 ----------LEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG--VEAKLLHPETEAALTR-  350 (469)
T ss_pred             ----------HHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHHHHHHC-
T ss_conf             ----------999866081779999864424015846544653499999999999999859--9978789999999974-


Q ss_pred             CCCCCCCCHHHHHHHHHHHH
Q ss_conf             89822062157999998733
Q gi|254780877|r  802 GYDPSYGARPLKRVIQRYIQ  821 (853)
Q Consensus       802 ~~~~~~GaR~l~r~i~~~i~  821 (853)
T Consensus       351 -y~WPGNvrEL~n~ier~~~  369 (469)
T PRK10923        351 -LAWPGNVRQLENTCRWLTV  369 (469)
T ss_pred             -CCCCCHHHHHHHHHHHHHH
T ss_conf             -9999879999999999998