HHsearch alignment for GI: 254780877 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=98.46 E-value=4.3e-06 Score=68.51 Aligned_cols=204 Identities=21% Similarity=0.362 Sum_probs=118.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCC--CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHH------
Q ss_conf 29853333357899999996336--7778668952887407779999999873489984445743788731354------
Q gi|254780877|r 174 NGKLDPVIGRDDEMRRAIQVLSR--RTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGAL------ 245 (853)
Q Consensus 174 ~GkLDPVIGRe~EI~~~~~iL~r--~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l------ 245 (853)
T Consensus 134 ~~~~~~liG~S~~m~~v~~~i~~~a~~~~pVLI~GE~GTGK~~~Ar~IH~~S-------~r~~~pfi~vnC~~~~~~~~e 206 (469)
T PRK10923 134 NGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHS-------PRAKAPFIALNMAAIPKDLIE 206 (469)
T ss_pred CCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCC-------CCCCCCCEEEECCCCCHHHHH
T ss_conf 0675565468999999999999985889978998989826999999999748-------877999578767889977899
Q ss_pred --HCCCCCCCHHHHH---HHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC-------------C
Q ss_conf --2174542024545---899999986079976999636277302666554335888876531246-------------6
Q gi|254780877|r 246 --IAGAKFRGEFEER---LKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG-------------E 307 (853)
Q Consensus 246 --~ag~~~rg~~e~r---~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG-------------~ 307 (853)
T Consensus 207 ~eLFG-~~~gaf~ga~~~~~g~~e~---a~~G-TLfLdeI~~L--------~~~~Q~kLl~~L~~~~~~~~g~~~~~~~d 273 (469)
T PRK10923 207 SELFG-HEKGAFTGANTIRQGRFEQ---ADGG-TLFLDEIGDM--------PLDVQTRLLRVLADGQFYRVGGYAPVKVD 273 (469)
T ss_pred HHHHC-CCCCCCCCCCCCCCCCHHH---CCCC-CEEHHHHHHC--------CHHHHHHHHHHHHCCCEEECCCCCEEEEC
T ss_conf 99708-7667878864245873664---3899-2656636648--------99999999999855937857998512214
Q ss_pred EEEEEEECHHHHHHHHHCC---HHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-CCC
Q ss_conf 0489974489999973001---113202311111577767899999997898654149610158999998633320-245
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKD---PALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRY-ITD 383 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD---~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rY-i~~ 383 (853)
T Consensus 274 ~RiIaat~~~L-~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~L~~~f---------------l~~~~~~~~~~~ 337 (469)
T PRK10923 274 VRIIAATHQNL-EQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHF---------------LQVAARELGVEA 337 (469)
T ss_pred CEEEEECCCCH-HHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHH---------------HHHHHHHCCCCC
T ss_conf 37997078799-99866081779999864424015846544653499999999---------------999999859997
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 767477899999999987541022214578879999974
Q gi|254780877|r 384 RFLPDKAIDLMDEASARVRMQIDTKPEVLDELDRRIICL 422 (853)
Q Consensus 384 r~lPDKAIDllDeA~A~~~i~~~~~P~~l~~l~r~i~~l 422 (853)
T Consensus 338 ~~~s~~a~~~---------L~~y~WPGNvrEL~n~ier~ 367 (469)
T PRK10923 338 KLLHPETEAA---------LTRLAWPGNVRQLENTCRWL 367 (469)
T ss_pred CCCCHHHHHH---------HHCCCCCCHHHHHHHHHHHH
T ss_conf 8789999999---------97499998799999999999