HHsearch alignment for GI: 254780877 and conserved domain: PRK11034
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional.
Probab=99.14 E-value=1.2e-06 Score=73.04 Aligned_cols=63 Identities=13% Similarity=0.126 Sum_probs=54.0
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 717999999999999999828996338999999861887668999997399989999999999
Q gi|254780877|r 5 KYSDLMRNVLQSAQTYALAQGHQNLVPEHVLHIFLEDEQGAVYSLIQCSGGDIAQLKDYNQTV 67 (853)
Q Consensus 5 kFS~~a~~vL~~A~~~A~~~~H~~Vt~EHLLlaLL~~~~s~i~~iL~~~gvd~~~L~~~le~~ 67 (853)
T Consensus 79 ~~t~~~~rvl~~A~~~a~~~g~~~v~~~~lLlall~e~~~~a~~~L~~~~i~~~~~~~~i~~~ 141 (758)
T PRK11034 79 QPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHG 141 (758)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf 877789999999999999839983049999999971785589999997799889999999722