HHsearch alignment for GI: 254780877 and conserved domain: PRK13407

Probab=98.46  E-value=2.6e-05  Score=62.06  Aligned_cols=150  Identities=31%  Similarity=0.487  Sum_probs=86.7

Q ss_pred             CCCHHHHHHHHHHHHC-CCCCCCEEEECCCCCCHHHHHHHHHHHHHC-----C---------CCCHHH---------CCC
Q ss_conf             3335789999999633-677786689528874077799999998734-----8---------998444---------574
Q gi|254780877|r  180 VIGRDDEMRRAIQVLS-RRTKNNPVLIGDPGVGKTAIIEGLASRIIN-----G---------DIPESL---------KGK  235 (853)
Q Consensus       180 VIGRe~EI~~~~~iL~-r~~k~n~~lvGe~GvGKtaive~la~~i~~-----~---------~vp~~l---------~~~  235 (853)
T Consensus        10 IvG-Qe~~K~AL~laav~p~~ggvLi~G~~GtgKStlaR~l~~iLP~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (334)
T PRK13407         10 IVG-QEEMKQAMVLTAIDPGIGGVLVFGDRGTGKSTAVRALAALLPLIKAVEGCPVNSARPEDCPEWAEVSSTTMVERPT   88 (334)
T ss_pred             HCC-CHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf             649-3999999999772789860899789986599999999972899511036755667742113343114555344899


Q ss_pred             EE-------------EEEEHH-HHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf             37-------------887313-5421745420245458999999860799769996362773026665543358888765
Q gi|254780877|r  236 RL-------------MALDMG-ALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKP  301 (853)
Q Consensus       236 ~i-------------~~ld~~-~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP  301 (853)
T Consensus        89 p~v~lPl~atedr~~G~ldie~al~~G~~---~~~P---GlLa---~Ah-~GVLylDEinll~--------~~vld~Ll~  150 (334)
T PRK13407         89 PVIDLPLGATEDRVVGALDIERALTRGEK---AFEP---GLLA---RAN-RGYLYIDEVNLLE--------DHIVDLLLD  150 (334)
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHCCCC---CCCC---CHHH---HCC-CCEEEEECHHHCC--------HHHHHHHHH
T ss_conf             87678999998664474218888626987---7886---0543---402-8867872053333--------889999998


Q ss_pred             HHCCCC---------------EEEEEEECHHHHHHHHHCCHHHHHCCC-EEECCCC-CHHHHHHHHHH
Q ss_conf             312466---------------048997448999997300111320231-1111577-76789999999
Q gi|254780877|r  302 SLARGE---------------LHCIGATTLDEYRKYIEKDPALARRFQ-SLLVGEP-TVTDTISILRG  352 (853)
Q Consensus       302 ~LarG~---------------l~~IgaTT~~Eyrk~iEkD~Al~RRFq-~i~V~Ep-s~~~t~~iL~g  352 (853)
T Consensus       151 ~~e~G~~~IeReg~s~~~ParF~LVatmNPeEg----~Lrp~lLDRf~l~v~v~~~~~~~~r~eiv~r  214 (334)
T PRK13407        151 VAQSGENVVEREGLSIRHPARFVLVGSGNPEEG----ELRPQLLDRFGLSVEVRSPRDVETRVEVITR  214 (334)
T ss_pred             HHHCCCEEEEECCEEEECCCCCEEEEEECCCCC----CCCHHHHHHHCEEEEECCCCCHHHHHHHHHH
T ss_conf             871695799977634603662658982088877----7598998361006871487887776688999