HHsearch alignment for GI: 254780877 and conserved domain: PRK13851

Probab=95.98  E-value=0.18  Score=31.00  Aligned_cols=90  Identities=28%  Similarity=0.450  Sum_probs=56.4

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC-CHHHHC--CCCCCCHHHCCCCHHCCCCCC-----CCCCHHHHCCCC
Q ss_conf             898726786168899999998723776530022-447740--345320130477112035667-----742113221564
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRI-DMSEYM--EKHSVSRLIGSPPGYVGYEEG-----GALTEAVRRHPY  671 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~-dMsey~--e~~~vs~LiGappGYvG~~~g-----g~Lte~vr~~P~  671 (853)
T Consensus       164 NIlIsGgTGSGKTTllnALl~~IP~-~eRIvtIEDt~EL~l~~~n~V~l~~-~~~---~~g~~~vt~~~Ll~~aLRmrPD  238 (343)
T PRK13851        164 TMLLCGPTGSGKTTMSKTLISAIPP-QERLITIEDTLELVIPHENHVRLLY-SKN---GAGLGAVTAEHLLQASLRMRPD  238 (343)
T ss_pred             CEEEECCCCCCHHHHHHHHHHCCCC-CCCEEEECCCCCCCCCCCCEEEEEE-CCC---CCCCCCCCHHHHHHHHHCCCCC
T ss_conf             8999888986199999999962896-5527996115002589999689996-589---8885839799999998607998


Q ss_pred             CEEEEHHHHHCCHHHHHHHHHHHHCCE
Q ss_conf             102202144149899999999840457
Q gi|254780877|r  672 QVVLFDEIEKAHSDVHNILLQVLDDGR  698 (853)
Q Consensus       672 sVil~DEiEKah~~v~~~llqild~G~  698 (853)
T Consensus       239 R-IivGEvR--G~EA~d-~L~A~nTGH  261 (343)
T PRK13851        239 R-ILLGEMR--DDAAWA-YLSEVVSGH  261 (343)
T ss_pred             E-EEEEEEC--CHHHHH-HHHHHHCCC
T ss_conf             2-8998526--699999-999984699