HHsearch alignment for GI: 254780877 and conserved domain: PRK13946
>PRK13946 shikimate kinase; Provisional.
Probab=96.84 E-value=0.034 Score=36.77 Aligned_cols=145 Identities=18% Similarity=0.277 Sum_probs=67.7
Q ss_pred HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC--CCCHHHCCCEEEEEEHHHHHCCCCCCCH--HHHHHHHHHHHH
Q ss_conf 996336777866895288740777999999987348--9984445743788731354217454202--454589999998
Q gi|254780877|r 191 IQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIING--DIPESLKGKRLMALDMGALIAGAKFRGE--FEERLKSLLCEI 266 (853)
Q Consensus 191 ~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~--~vp~~l~~~~i~~ld~~~l~ag~~~rg~--~e~r~~~i~~~~ 266 (853)
T Consensus 12 ~~~~~~l~kknIvLIG~mGsGKStvGk~LA~~L~~~fiD~D~~IE--~~~g~sI~eIF~---~~GE~~FR~~E~~~l~~l 86 (195)
T PRK13946 12 EQIRAALGKRTVVLVGLMGAGKSTVGRRLATMLGLPFLDADTEIE--RAARMTIPEIFA---TYGEPEFRDLERRVIARL 86 (195)
T ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECHHHHH--HHHCCCHHHHHH---HHCHHHHHHHHHHHHHHH
T ss_conf 999998589958998999998899999999997979898859999--980998999999---869799999899999998
Q ss_pred HHCCCCEEEEECCHHHHCCCCCCCCCCCHHH--HHHHHHCCCCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHH
Q ss_conf 6079976999636277302666554335888--87653124660489974489999973001113202311111577767
Q gi|254780877|r 267 RSEDGEIILFIDELHVLVGAGKTDGAMDASN--LLKPSLARGELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVT 344 (853)
Q Consensus 267 ~~~~~~~ilfide~h~~~gaG~~~g~~Daan--~LKP~LarG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~ 344 (853)
T Consensus 87 ~~~~-~~V---------IstGGG~-v~~~~n~~~L~---~~g~v-I~L~~~~e~l~~Rl~~~~--~RP----Ll~~~~~~ 145 (195)
T PRK13946 87 LKGG-PLV---------LATGGGA-FMNEETRAAIR---EKGIS-VWLKADLDVLWERVSRRD--TRP----LLRTADPK 145 (195)
T ss_pred HCCC-CEE---------EECCCCC-CCCHHHHHHHH---HCCEE-EEEECCHHHHHHHHCCCC--CCC----CCCCCCHH
T ss_conf 6489-879---------9758742-36899999999---57968-998499999999972899--999----89998879
Q ss_pred HHH-HHHHHHHHHHHHHC
Q ss_conf 899-99999789865414
Q gi|254780877|r 345 DTI-SILRGLKERYEQHH 361 (853)
Q Consensus 345 ~t~-~iL~gl~~~yE~~H 361 (853)
T Consensus 146 ~~l~~l~~~R~~lY~~Ad 163 (195)
T PRK13946 146 ETLARLMEERYPVYAQAD 163 (195)
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999789