HHsearch alignment for GI: 254780877 and conserved domain: PTZ00111
>PTZ00111 DNA replication licensing factor MCM4; Provisional.
Probab=96.90 E-value=0.038 Score=36.39 Aligned_cols=182 Identities=18% Similarity=0.226 Sum_probs=99.4
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHC-CCCCCCCCC-----------EEEEEECCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 23554776745948999999999987410-123656651-----------289872678616889999999872377653
Q gi|254780877|r 561 RIETEISKSVIGQSAAVESVSNALRRFRA-GLQDPQRPM-----------GSFMFLGPTGVGKTELVKSLARLLFDDENS 628 (853)
Q Consensus 561 ~l~~~l~~~v~gq~~ai~~v~~~~~~~~~-gl~~~~~p~-----------~~flf~GptGvGKTelak~la~~lf~~~~~ 628 (853)
T Consensus 444 ~L~~SiAPSI~~~~dvKkgillqLFGg~~k~~~~~~~~~~~~~~~~~RgdIniLl~GDPgtaKSQlL~yv~~ia---PRg 520 (916)
T PTZ00111 444 ILLDSFAPSIKARNNVKIGLLCQLFSCNANSSDNNKSPDACYKVDNFRGIINVLLCGDPGTAKSQLLHYTHLLS---PRS 520 (916)
T ss_pred HHHHHHCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHC---CCE
T ss_conf 99873086211522699999999848875456778776544444443454059995799601899999999728---742
Q ss_pred CCCCCHHHHCC--CCCCCHHHCCCCHHCCCC--CCCCCC---HHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEEC
Q ss_conf 00224477403--453201304771120356--677421---13221564102202144149899999999840457887
Q gi|254780877|r 629 MIRIDMSEYME--KHSVSRLIGSPPGYVGYE--EGGALT---EAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTD 701 (853)
Q Consensus 629 lir~dMsey~e--~~~vs~LiGappGYvG~~--~gg~Lt---e~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd 701 (853)
T Consensus 521 v-------ytsGkgsSavGLTA----~v~~~d~~tg~~~LEaGALVLaD~GvccIDEFDKM~~~~rs~lhEaMEQQtv-- 587 (916)
T PTZ00111 521 I-------YTSGKSSSSVGLTA----SIKFNESDNGRAMIQPGAVVLANGGVCCIDELDKCHNESRLSLYEVMEQQTV-- 587 (916)
T ss_pred E-------EECCCCCCCCCCEE----EEEECCCCCCCEEEECCCEEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHH--
T ss_conf 6-------74598654226468----9983268878689854808972798799622203685678899998866312--
Q ss_pred CCCCEEECCCCEEEECCCHHHHHHHCCH-HHH----HHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHH
Q ss_conf 9997783033155954851268764032-679----9999999986288577266681586288998999
Q gi|254780877|r 702 SQGRTVDFRNTLIIMTSNLGAEYLIEDG-DSV----HDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDM 766 (853)
Q Consensus 702 ~~G~~v~f~n~iii~TsN~G~~~~~~~~-~~~----~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~ 766 (853)
T Consensus 588 ------SIAKAGI~~tLnARtSvLAaANP~~gry~~~~~v~en--I~lpp~LLSRFDLIfl~lD~~de~~ 649 (916)
T PTZ00111 588 ------TIAKAGIVATLKAETAILASCNPINSRYNKNKAVIEN--INISPSLFTRFDLIYLVLDHIDQDT 649 (916)
T ss_pred ------HHHHCCEEEEECHHHHHHHHCCCCCCCCCCCCCHHHH--CCCCCHHHHHHHEEEEEECCCCHHH
T ss_conf ------3532350454120345655328655657878676764--5799403312204677505786566