HHsearch alignment for GI: 254780877 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=98.94 E-value=2.9e-09 Score=94.22 Aligned_cols=129 Identities=34% Similarity=0.564 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCH-HHHCCCCCCCHHHCCC
Q ss_conf 948999999999987410123656651289872678616889999999872377653002244-7740345320130477
Q gi|254780877|r 572 GQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDM-SEYMEKHSVSRLIGSP 650 (853)
Q Consensus 572 gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dM-sey~e~~~vs~LiGap 650 (853)
T Consensus 2 i~t~~v~~v~~R~l~y----L~~G~Pv---Hl~GPaG~GKT~LA~hvA~~r---~RPV~l~~Gd~eL----~~~DLvG~~ 67 (265)
T TIGR02640 2 IETDAVKRVTSRALRY----LKSGYPV---HLRGPAGTGKTTLAMHVARKR---DRPVVLINGDAEL----TTSDLVGSY 67 (265)
T ss_pred CCCHHHHHHHHHHHHH----HCCCCCE---EEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCC----CCCCCCCCC
T ss_conf 8772379999987663----2278866---744788855689999999736---8968998658232----654423154
Q ss_pred CHHCCC---C-----------------CCCCCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCC----CCE
Q ss_conf 112035---6-----------------6774211322156410220214414989999999984045788799----977
Q gi|254780877|r 651 PGYVGY---E-----------------EGGALTEAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQ----GRT 706 (853)
Q Consensus 651 pGYvG~---~-----------------~gg~Lte~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~----G~~ 706 (853)
T Consensus 68 ~g~~~~kv~DqfihnV~K~~d~~~~~W~D~rLt~Av~e-G~-TLVYdEF~RskP~~nNVLLSvlEE~vL~LPg~~~~~~Y 145 (265)
T TIGR02640 68 AGYTRKKVVDQFIHNVVKLEDIVRQNWVDNRLTLAVRE-GF-TLVYDEFTRSKPETNNVLLSVLEEGVLELPGKRGESRY 145 (265)
T ss_pred CCCEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHC-CC-EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 67522223201211134251220026678357899756-97-27664757886204565675555232158887877872
Q ss_pred E----ECCCCEEEECCC
Q ss_conf 8----303315595485
Q gi|254780877|r 707 V----DFRNTLIIMTSN 719 (853)
Q Consensus 707 v----~f~n~iii~TsN 719 (853)
T Consensus 146 v~VhP~FR---~IfTSN 159 (265)
T TIGR02640 146 VDVHPEFR---VIFTSN 159 (265)
T ss_pred EEECCCCC---EEECCC
T ss_conf 25788702---463148