HHsearch alignment for GI: 254780877 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=96.26 E-value=0.014 Score=39.93 Aligned_cols=137 Identities=26% Similarity=0.341 Sum_probs=91.9
Q ss_pred CEEEECCCCCCHHHHHHHHHHHH------HCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH------
Q ss_conf 66895288740777999999987------348998444574378873135421745420245458999999860------
Q gi|254780877|r 201 NPVLIGDPGVGKTAIIEGLASRI------INGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRS------ 268 (853)
Q Consensus 201 n~~lvGe~GvGKtaive~la~~i------~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~------ 268 (853)
T Consensus 23 PvHl~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd-------~eL~~~DLvG~~~g~~~~kv~DqfihnV~K~~d~~~~~W~ 95 (265)
T TIGR02640 23 PVHLRGPAGTGKTTLAMHVARKRDRPVVLINGD-------AELTTSDLVGSYAGYTRKKVVDQFIHNVVKLEDIVRQNWV 95 (265)
T ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC-------CCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCC
T ss_conf 667447888556899999997368968998658-------2326544231546752222320121113425122002667
Q ss_pred --------CCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC------------------CEEEEEEECHHHHHHH
Q ss_conf --------79976999636277302666554335888876531246------------------6048997448999997
Q gi|254780877|r 269 --------EDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG------------------ELHCIGATTLDEYRKY 322 (853)
Q Consensus 269 --------~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG------------------~l~~IgaTT~~Eyrk~ 322 (853)
T Consensus 96 D~rLt~Av~eG-~TLVYdEF~------Rsk--P~~nNVLLSvlEE~vL~LPg~~~~~~Yv~VhP~FR~IfTSNp~EYAGV 166 (265)
T TIGR02640 96 DNRLTLAVREG-FTLVYDEFT------RSK--PETNNVLLSVLEEGVLELPGKRGESRYVDVHPEFRVIFTSNPVEYAGV 166 (265)
T ss_pred CCHHHHHHHCC-CEEEECCCC------CCC--CHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCC
T ss_conf 83578997569-727664757------886--204565675555232158887877872257887024631487010576
Q ss_pred HHCCHHHHHCCCEEECCCCCHHHHHHHHHHH
Q ss_conf 3001113202311111577767899999997
Q gi|254780877|r 323 IEKDPALARRFQSLLVGEPTVTDTISILRGL 353 (853)
Q Consensus 323 iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl 353 (853)
T Consensus 167 h~~QDALlDRL~ti~~D~~D~~~e~ai~~~~ 197 (265)
T TIGR02640 167 HETQDALLDRLVTISMDYPDEDTETAILRAK 197 (265)
T ss_pred CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 7716677664400457854447899999986