HHsearch alignment for GI: 254780877 and conserved domain: TIGR02903
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=99.06 E-value=2.5e-09 Score=94.76 Aligned_cols=227 Identities=26% Similarity=0.449 Sum_probs=147.8
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-------CCCCCCCCCCCHHHHC-
Q ss_conf 76745948999999999987410123656651289872678616889999999872-------3776530022447740-
Q gi|254780877|r 567 SKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLL-------FDDENSMIRIDMSEYM- 638 (853)
Q Consensus 567 ~~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~l-------f~~~~~lir~dMsey~- 638 (853)
T Consensus 154 f~EiVGQerAI~aLlaK-------~aSPf-PQ-HiiLYGPPGVGKTTaARl~LEe~K~~~~tPF~~DA~FvEVDGtTLRW 224 (616)
T TIGR02903 154 FSEIVGQERAIKALLAK-------LASPF-PQ-HIILYGPPGVGKTTAARLALEEAKKLKNTPFAEDAPFVEVDGTTLRW 224 (616)
T ss_pred CCCCCCHHHHHHHHHHH-------HCCCC-CC-CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 76433346899999976-------31888-66-07855733884789999987621368744761137857515762667
Q ss_pred CCCC-CCHHHCC--CCHHCCCC-----C------CCCCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCC
Q ss_conf 3453-2013047--71120356-----6------7742113221564102202144149899999999840457887999
Q gi|254780877|r 639 EKHS-VSRLIGS--PPGYVGYE-----E------GGALTEAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQG 704 (853)
Q Consensus 639 e~~~-vs~LiGa--ppGYvG~~-----~------gg~Lte~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~G 704 (853)
T Consensus 225 DPREvTNPLLGSVHDPIYQGa~RDLAE~GvPEPk~GLVT~A---H-GGvLFIDEIGELD~lLQnKLLKVLEDK------- 293 (616)
T TIGR02903 225 DPREVTNPLLGSVHDPIYQGARRDLAETGVPEPKLGLVTDA---H-GGVLFIDEIGELDPLLQNKLLKVLEDK------- 293 (616)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC---C-CCEEEEECHHHHHHHHHHHHHHHHCCC-------
T ss_conf 74101477677625765567640110478798989871004---7-756765021122278763244432264-------
Q ss_pred CEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHC---------------------CHHHHCCCCCEEECCCCCH
Q ss_conf 7783033155954851268764032679999999998628---------------------8577266681586288998
Q gi|254780877|r 705 RTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAF---------------------KPEFLNRLDEIILFEKLRK 763 (853)
Q Consensus 705 ~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f---------------------~peflnRid~iv~F~~l~~ 763 (853)
T Consensus 294 -rV~F~SsY---------------YDpdD~NvPkYIK~lFe~GAPADFvLIGATTr~P~eINpALRSRCaE-vfFePL~p 356 (616)
T TIGR02903 294 -RVEFSSSY---------------YDPDDENVPKYIKKLFEEGAPADFVLIGATTRDPEEINPALRSRCAE-VFFEPLTP 356 (616)
T ss_pred -EEEEEECC---------------CCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHCCHHHHCCCCE-EECCCCCH
T ss_conf -36653212---------------48753786558888522688825687266158824405123301431-32179887
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 99999999999999999985798999988999999970898220621579999987334999999708688978899999
Q gi|254780877|r 764 EDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQRYIQNPLAERVLSQTISDGDSIEVFV 843 (853)
Q Consensus 764 ~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~~i~~~la~~il~~~~~~g~~i~i~~ 843 (853)
T Consensus 357 ~dI~~Iv~~AA---------~klnv~L~~gV~e~Ia~--YTie-G-RkAvnILAD~Y--g~~ly~~~~~~~~~d~~~I~~ 421 (616)
T TIGR02903 357 EDIKEIVLNAA---------EKLNVKLAEGVEELIAR--YTIE-G-RKAVNILADVY--GYALYKKAEALKEEDKVTITA 421 (616)
T ss_pred HHHHHHHHHHH---------HHCCCCCCCCHHHHHHH--CCCC-C-HHHHHHHHHHH--HHHHHCCCCCCCCCCCEEEEH
T ss_conf 89999999988---------86177000364878721--4713-1-12223465467--676530455567777426618
Q ss_pred EC
Q ss_conf 89
Q gi|254780877|r 844 DD 845 (853)
Q Consensus 844 ~~ 845 (853)
T Consensus 422 ~d 423 (616)
T TIGR02903 422 DD 423 (616)
T ss_pred HH
T ss_conf 67