>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..

Probab=98.72 E-value=5.5e-07 Score=75.72 Aligned_cols=205 Identities=25% Similarity=0.394 Sum_probs=137.3 Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC-CCCHHHCCCEEEEEEHHHHHCCCC Q ss_conf 8729853333357899999996336777866895288740777999999987348-998444574378873135421745 Q gi|254780877|r 172 ARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIING-DIPESLKGKRLMALDMGALIAGAK 250 (853) Q Consensus 172 Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~-~vp~~l~~~~i~~ld~~~l~ag~~ 250 (853) T Consensus 149 LRP~~f~EiVGQerAI~aLlaK~aSPfPQHiiLYGPPGVGKTTaAR-l~LEe~K~~~~tPF~~DA~FvEVD------GtT 221 (616) T TIGR02903 149 LRPRAFSEIVGQERAIKALLAKLASPFPQHIILYGPPGVGKTTAAR-LALEEAKKLKNTPFAEDAPFVEVD------GTT 221 (616) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHH-HHHHHCCCCCCCCCCCCCCEEEEC------CCC T ss_conf 2876676433346899999976318886607855733884789999-987621368744761137857515------762 Q ss_pred CCCHHHHHH----------------------------HHHHHHHHHCCCCEEEEECCHHHH---CC--------CCCC-- Q ss_conf 420245458----------------------------999999860799769996362773---02--------6665-- Q gi|254780877|r 251 FRGEFEERL----------------------------KSLLCEIRSEDGEIILFIDELHVL---VG--------AGKT-- 289 (853) Q Consensus 251 ~rg~~e~r~----------------------------~~i~~~~~~~~~~~ilfide~h~~---~g--------aG~~-- 289 (853) T Consensus 222 LRWDPREvTNPLLGSVHDPIYQGa~RDLAE~GvPEPk~GLVT~---AHGG-vLFIDEIGELD~lLQnKLLKVLEDKrV~F 297 (616) T TIGR02903 222 LRWDPREVTNPLLGSVHDPIYQGARRDLAETGVPEPKLGLVTD---AHGG-VLFIDEIGELDPLLQNKLLKVLEDKRVEF 297 (616) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC---CCCC-EEEEECHHHHHHHHHHHHHHHHCCCEEEE T ss_conf 6677410147767762576556764011047879898987100---4775-67650211222787632444322643665 Q ss_pred CCC---CCHHHH---HHHHHCCC---CEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 543---358888---76531246---604899744899999730011132023111115777678999999978986541 Q gi|254780877|r 290 DGA---MDASNL---LKPSLARG---ELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQH 360 (853) Q Consensus 290 ~g~---~Daan~---LKP~LarG---~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~ 360 (853) T Consensus 298 ~SsYYDpdD~NvPkYIK~lFe~GAPADFvLIGATTr~P----~eINpALRSRCaEvfFePL~p~dI~~Iv~~AA~kl--- 370 (616) T TIGR02903 298 SSSYYDPDDENVPKYIKKLFEEGAPADFVLIGATTRDP----EEINPALRSRCAEVFFEPLTPEDIKEIVLNAAEKL--- 370 (616) T ss_pred EECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCH----HHCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHC--- T ss_conf 32124875378655888852268882568726615882----44051233014313217988789999999988861--- Q ss_pred CCCCCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 49610158999998633320-24576747789999999998754 Q gi|254780877|r 361 HKVRISDSALVSAAVLSNRY-ITDRFLPDKAIDLMDEASARVRM 403 (853) Q Consensus 361 H~V~i~d~al~~av~ls~rY-i~~r~lPDKAIDllDeA~A~~~i 403 (853) T Consensus 371 -nv~L~~gV~e~Ia----~YTieGR----kAvnILAD~Yg~~ly 405 (616) T TIGR02903 371 -NVKLAEGVEELIA----RYTIEGR----KAVNILADVYGYALY 405 (616) T ss_pred -CCCCCCCHHHHHH----HCCCCCH----HHHHHHHHHHHHHHH T ss_conf -7700036487872----1471311----222346546767653

HHsearch alignment for GI: 254780877 and conserved domain: TIGR02903