HHsearch alignment for GI: 254780877 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=99.22 E-value=1.3e-07 Score=80.82 Aligned_cols=66 Identities=18% Similarity=0.279 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH-HHHHHHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 6989999999999999971987025999876687277517-88999759998999999998737788
Q gi|254780877|r 83 LSQPLAVILSKSEEIAKKSGDSFVTAEKFLLAMVMETGGI-GESLKKCGLKFSRLEESIKKLRKGRV 148 (853)
Q Consensus 83 ~S~~l~rvL~~A~~~A~~~g~~~I~~ehLLlAIl~e~~s~-a~iL~~~gi~~~~l~e~i~~~~~~~~ 148 (853)
T Consensus 1 Lt~~~~~aL~~A~~~A~~~~H~~I~~eHLLlaLl~~~~~~~~~iL~~~gvd~~~l~~~l~~~l~~~~ 67 (852)
T TIGR03345 1 LNPTSRRALEQAAALCVARGHPEVELEHWLLALLDQPDSDLAAILRHFGVDLGRLKADLARALDKLP 67 (852)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 9889999999999999985998138999999998399747999999869999999999999996389