HHsearch alignment for GI: 254780877 and conserved domain: TIGR03346
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.
Probab=99.31 E-value=1.3e-07 Score=80.79 Aligned_cols=61 Identities=20% Similarity=0.395 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHH-HHHHHCCCCHHHHHHHHHHH
Q ss_conf 69899999999999999719870259998766872775178-89997599989999999987
Q gi|254780877|r 83 LSQPLAVILSKSEEIAKKSGDSFVTAEKFLLAMVMETGGIG-ESLKKCGLKFSRLEESIKKL 143 (853)
Q Consensus 83 ~S~~l~rvL~~A~~~A~~~g~~~I~~ehLLlAIl~e~~s~a-~iL~~~gi~~~~l~e~i~~~ 143 (853)
T Consensus 1 ft~~a~~aL~~A~~~A~~~~h~~V~~eHlLlaLl~~~~~~~~~~L~~~gvd~~~l~~~l~~~ 62 (852)
T TIGR03346 1 FTEKFQEALQAAQSLALGRDHQQIEPEHLLKALLDQEGGLARRLLQKAGVNVGALRQALEKE 62 (852)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 98899999999999999859990279999999973998479999998598999999999999