HHsearch alignment for GI: 254780877 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=96.53 E-value=0.047 Score=35.64 Aligned_cols=40 Identities=35% Similarity=0.507 Sum_probs=27.7
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHC--CCCCHHHCCCEEEEEEHHHH
Q ss_conf 6689528874077799999998734--89984445743788731354
Q gi|254780877|r 201 NPVLIGDPGVGKTAIIEGLASRIIN--GDIPESLKGKRLMALDMGAL 245 (853)
Q Consensus 201 n~~lvGe~GvGKtaive~la~~i~~--~~vp~~l~~~~i~~ld~~~l 245 (853)
T Consensus 196 vi~lvGPTGVGKTTTiAKLAa~~~l~~~~-----~~V~lIT~DtyRi 237 (282)
T TIGR03499 196 VIALVGPTGVGKTTTLAKLAARFVLEHGK-----KKVALITTDTYRI 237 (282)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCC-----CCEEEEEECCCCH
T ss_conf 79997788875788999999999997389-----9679998077767