>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.56  E-value=0.038  Score=36.43  Aligned_cols=36  Identities=36%  Similarity=0.550  Sum_probs=25.0

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             8987267861688999999987237765300224477
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSE  636 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~dMse  636 (853)
T Consensus        28 ~~~ivGpSG~GKSTllr~i~Gl~~p~~-G~I~~~g~~   63 (178)
T cd03229          28 IVALLGPSGSGKSTLLRCIAGLEEPDS-GSILIDGED   63 (178)
T ss_pred             EEEEECCCCCHHHHHHHHHHCCCCCCC-EEEEECCEE
T ss_conf             999999999839999999985999996-399999999