HHsearch alignment for GI: 254780877 and conserved domain: pfam07693
>pfam07693 KAP_NTPase KAP family P-loop domain. The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals. Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side.
Probab=97.58 E-value=0.0065 Score=42.65 Aligned_cols=124 Identities=14% Similarity=0.271 Sum_probs=71.5
Q ss_pred CEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCH-----
Q ss_conf 102202144149899999999840457887999778303315595485126876403267999999999862885-----
Q gi|254780877|r 672 QVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKP----- 746 (853)
Q Consensus 672 sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~p----- 746 (853)
T Consensus 162 iVviIDDLDRc~p~~~v~~Le~Ik---------~~~d~~n~vfVLa~D-------------~~~v~~al~~~~~~~~~~~ 219 (301)
T pfam07693 162 IVVIIDDLDRCEPEEAVELLEAVR---------LLFDFPNVVFILAYD-------------EEIIKKAIEHNYGGGEIDG 219 (301)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHH---------HHHCCCCEEEEEECC-------------HHHHHHHHHHHCCCCCCCH
T ss_conf 899973655488789999999999---------972679818999758-------------9999999998738787418
Q ss_pred -HHHCCCCC-EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCC-CCCCHHHHHHHHH
Q ss_conf -77266681-586288998999999999999999999857989999889999999708982-2062157999998
Q gi|254780877|r 747 -EFLNRLDE-IILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDP-SYGARPLKRVIQR 818 (853)
Q Consensus 747 -eflnRid~-iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~-~~GaR~l~r~i~~ 818 (853)
T Consensus 220 ~~YLeKiIq~p~~lP~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~nPR~ikR~lN~ 293 (301)
T pfam07693 220 QDYLEKIIQLPFKLPPLGLRELRRFLMTLFDALEKGTPSEDRDRGLRADDLNIILD-SEDKSNINPRELKRLINA 293 (301)
T ss_pred HHHHHHHEECEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHE
T ss_conf 99998541024767998789999999999999852444443202346789999997-411147999999998733