HHsearch alignment for GI: 254780877 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Probab=99.41  E-value=1e-12  Score=122.26  Aligned_cols=113  Identities=31%  Similarity=0.510  Sum_probs=86.8

Q ss_pred             EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCC---CHHCCCCCCCCCCHHHHCCCCCEEEEH
Q ss_conf             98726786168899999998723776530022447740345320130477---112035667742113221564102202
Q gi|254780877|r  601 FMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSP---PGYVGYEEGGALTEAVRRHPYQVVLFD  677 (853)
Q Consensus       601 flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGap---pGYvG~~~gg~Lte~vr~~P~sVil~D  677 (853)
T Consensus         2 vll~Gp~G~GKT~la~~la~~l~~--~~~~~i~~~~~~~~---~dl~G~~~~~~~~~~~~~-g~l~~a~~~-g-~vl~lD   73 (139)
T pfam07728         2 VLLVGPPGTGKSELAERLAAALSN--RPVFYVQLTRDTTE---EDLKGRRNIANGTTSWVD-GPLVRAARE-G-EIAVLD   73 (139)
T ss_pred             EEEECCCCCHHHHHHHHHHHHCCC--CCCHHHCCCCCCCH---HHCCCCEECCCCCEEEEC-CHHHCCCCC-C-CEEEEC
T ss_conf             899989975699999999998079--83111214655652---220573423799357815-514101012-8-689963


Q ss_pred             HHHHCCHHHHHHHHHHHHCCEEECCCC-CEEEC------CCCEEEECCCHH
Q ss_conf             144149899999999840457887999-77830------331559548512
Q gi|254780877|r  678 EIEKAHSDVHNILLQVLDDGRLTDSQG-RTVDF------RNTLIIMTSNLG  721 (853)
Q Consensus       678 EiEKah~~v~~~llqild~G~ltd~~G-~~v~f------~n~iii~TsN~G  721 (853)
T Consensus        74 Ein~a~~~v~~~L~~~le~~~~~~~~~~~~~~~~~~~~~~~f~viaT~N~~  124 (139)
T pfam07728        74 EINRANPDVLNSLLSLLDERRLLLPEGGELVKVAPDDFAKRFRLIATMNPL  124 (139)
T ss_pred             CHHHCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCEEEEEEECCC
T ss_conf             434489999999999974896983689727336666789996999975896