HHsearch alignment for GI: 254780877 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=98.46 E-value=9.7e-08 Score=81.85 Aligned_cols=119 Identities=24% Similarity=0.275 Sum_probs=72.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCH---HH-CCCCHHCCCCCCCCCCHHHHCCCCCEE
Q ss_conf 28987267861688999999987237765300224477403453201---30-477112035667742113221564102
Q gi|254780877|r 599 GSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSR---LI-GSPPGYVGYEEGGALTEAVRRHPYQVV 674 (853)
Q Consensus 599 ~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~---Li-GappGYvG~~~gg~Lte~vr~~P~sVi 674 (853)
T Consensus 3 ~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 82 (148)
T smart00382 3 EVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALARKLKPDVL 82 (148)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 78999999970299999999987266899689987599898889876530001122105199999999999984499899
Q ss_pred EEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCH
Q ss_conf 2021441498999999998404578879997783033155954851
Q gi|254780877|r 675 LFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNL 720 (853)
Q Consensus 675 l~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~ 720 (853)
T Consensus 83 iiDei~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~vi~~~n~ 125 (148)
T smart00382 83 ILDEITSLLDAEQEALLLLLEE---LRLLLLLKSEKNLTVILTTND 125 (148)
T ss_pred EEECCHHHCCCCCHHHHHHHHH---HHHHCCCCCCCCEEEEEEECC
T ss_conf 9827502147620799999999---998517657899899995699